This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

Development Team

The Development Team

Pathoplexus was set up in collaboration with PHA4GE and the Loculus team. Here’s who has been key in the software development of Pathoplexus:

Picture of Emma Hodcroft
Emma Hodcroft
Swiss TPH; University of Basel
Picture of Theo Sanderson
Theo Sanderson
London School of Hygiene & Tropical Medicine
Picture of Chaoran Chen
Chaoran Chen
ETH Zurich
Picture of Cornelius Roemer
Cornelius Roemer
University of Basel
Picture of Alex Taepper
Alex Taepper
ETH Zurich
Picture of Anna Parker
Anna Parker
ETH Zurich
Picture of Tanja Stadler
Tanja Stadler
ETH Zurich
Picture of Richard Neher
Richard Neher
University of Basel
Picture of Fabian Engelniederhammer
Fabian Engelniederhammer
TNG
Picture of Tobias Kampmann
Tobias Kampmann
TNG
Picture of Jonas Zarzalis
Jonas Zarzalis
TNG
Picture of Artem Babaian
Artem Babaian
University of Toronto
Picture of Alex Morales
Alex Morales
University of Toronto
Picture of Luke Pereira
Luke Pereira
University of Toronto
Picture of Felix Hennig
Felix Hennig
Freelance software engineer

Curators

In addition we’re happy to have a set of dedicated Curators who assess and evaluate potential issues with sequences and metadata. You can read about how they make decisions in data curation here.

If you are interested in helping to curate Pathoplexus, contact us at curators@pathoplexus.org

Picture of Emily Smith
Emily Smith
Theiagen Genomics
Picture of Gültekin Ünal
Gültekin Ünal
Ankara University
Picture of Emma Hodcroft
Emma Hodcroft
Swiss TPH; University of Basel
Picture of Theo Sanderson
Theo Sanderson
Francis Crick Institute
Picture of Chaoran Chen
Chaoran Chen
ETH Zurich
Picture of Cornelius Roemer
Cornelius Roemer
University of Basel