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PPD_0062WU5.2

Display Name: Canada/PPD_0062WU5.2/2025
J. Audet, K. Soriano, A. Leung, D. Safronetz & J. Strong

Sample details

Collection date
2025
Country
Canada
Isolate name
Ebola virus/VECTOR/C.porcellus-lab/COD/1976/Mayinga_NML

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-07-08 14:41insdc_ingest_userOPEN
Data use terms URL

Outbreak

Outbreak
Ebov-1976

Authors

Author affiliations
National Microbiology Laboratory - Public Health Agency of Canada, Winnipeg, Manitoba

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2025-06-28
NCBI update date
2025-10-21

Host

Host taxon ID
Host name - scientific
Cavia porcellus

Alignment and QC metrics

Length
18582
Completeness
98.01%
# of SNPs
9
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
OZ276552.1
Submitting group
Date submitted
2025-10-26 16:45:45 UTC
Date released
2025-10-26 16:55:11 UTC
Earliest release date
2025-06-28

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions

  • A1003C
  • T4429C
  • C5053T
  • T6424C
  • C10420T
  • C10741A
  • G13053A
  • A13710G
  • A13968G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_002549.1 reference

    Substitutions

    GP

  • GP:I129T

    • VP24

  • VP24:L26F
  • VP24:H133N

    • VP40

  • VP40:T192I

    • sGP

  • sGP:I129T

    • ssGP

  • ssGP:I129T
    • Deletions
    None
    Insertions
    None

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