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PPD_0047L3Q.2

Display Name: Portugal/PPD_0047L3Q.2/2024
L. Ze-Ze, C. Nunes, M. Sousa, R. de Sousa, C. Gomes, A. S. Santos, R. T. Alexandre, F. Amaro, T. Loza, M. Blanco & M. J. Alves

Sample details

Collection date
2024
Country
Portugal
Isolate name
PTHuCCHFV79532_INSA2024

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2024-12-16 03:21insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
National Institute of Health Dr. Ricardo Jorge P.I. (INSA), Center for Vectors and Infectious Disease Research (CEVDI)

INSDC

INSDC accession S
NCBI release date
2024-12-15

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics S

Length S
122
Completeness S
7.30%
# of SNPs S
7
# of inserted bases S
0
# of deleted bases S
0
# of ambiguous bases S
0
# of unknown bases S
0
# of frame shifts S
0
# of stop codons S
0

Submission details

Submission ID
PQ200212.1.S
Submitting group
Date submitted
2025-09-19 09:57:06 UTC
Date released
2025-09-19 09:57:59 UTC
Earliest release date
2024-12-15

Lineage

Segment S Lineage
III

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:G47C
  • S:A50G
  • S:G54A
  • S:G67A
  • S:G99A
  • S:G100A
  • S:A121G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:R15K
    • Deletions
    None
    Insertions
    None

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