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Democratic_Republic_of_the_Congo/seq0001/2026-05-26
E. Kinganda-Lusamaki, A. Black, D. B. Mukadi, J. Hadfield, P. Mbala-Kingebeni, C. B. Pratt, A. Aziza, M. M. Diagne, B. White, N. Bisento, B. Nsunda, M. Akonga, M. Faye, O. Faye, F. Edidi-Atani, M. Matondo-Kuamfumu, F. Mambu-Mbika, J. Bulabula, N. Di Paola, M. G. Pauthner, K. G. Andersen, G. Palacios, E. Delaporte, A. A. Sall, ..., K. Prieto

University of Nebraska Medical Center, College of Public Health

Sample details

Collection date
2026-05-26
Sampling location
Democratic Republic of the Congo

Data use terms

Data use terms
OPEN

Outbreak

Outbreak
Ebov-2018b

Submission details

Submission ID
seq0001
Submitting group
Date submitted
2026-10-08 10:17:23 UTC
Date released
2026-10-08 10:17:33 UTC
Earliest release date
2026-10-08

Files


Alignment and QC

Length
18802 (98.5%)
# of SNPs
304
# of inserted bases
6
# of deleted bases
2
# of unknown bases
125

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions
  • A214G
  • C230T
  • T246C
  • C339T
  • G381A
  • A388G
  • T445A
  • A491G
  • C493T
  • G500A
  • G507A
  • A547G
  • C559T
  • A607C
  • A619G
  • C751T
  • C775T
  • A931C
Deletions
18403, 18404
Insertions
ins_18632:TCCTTA

Amino acid substitutions

Substitutions called relative to the NC_002549.1 reference

Substitutions

GP

  • GP:V3A
  • GP:V75A
  • GP:V310A
  • GP:L368P
  • GP:S377P
  • GP:S422P
  • GP:P429A
  • GP:A432T
  • GP:T435A
  • GP:F443L
  • GP:E457K
  • GP:K478R
  • GP:I544T

L

  • L:V79I
  • L:E130D
  • L:Q133H
  • L:T233N
  • L:I272V
  • L:S428N
  • L:E539K
  • L:S1383N
  • L:V1597A
  • L:F1610L
  • L:R1657G
  • L:T1679I
  • L:R1681S
  • L:N1739S
  • L:F1742S
  • L:G1753S
  • L:Q1793R
  • L:I1824M

NP

  • NP:I8V
  • NP:A11T
  • NP:S13N
  • NP:V459I
  • NP:N478S
  • NP:T503I
  • NP:I517T
  • NP:T522A
  • NP:I527T
  • NP:A540D
  • NP:N547H
  • NP:D548N
  • NP:S644P

VP24

  • VP24:K15Q
  • VP24:T34A
  • VP24:K163Q
  • VP24:M212K

VP35

  • VP35:A13V
  • VP35:Y55H
  • VP35:A56V
  • VP35:I78M
  • VP35:A180T
  • VP35:N204D

VP40

  • VP40:N23K
  • VP40:G29S
  • VP40:T255A
  • VP40:T277N

sGP

  • sGP:V3A
  • sGP:V75A
  • sGP:G331V

ssGP

  • ssGP:V3A
  • ssGP:V75A
Deletions
N/A
Insertions
N/A

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