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PPD_00T5SCF.1

Uganda/BX4.11_33_E2_F-Pan_Nairo_F/2025-11-21
M. G. Onyango

Texas Tech University, Biology

Sample details

Collection date
2025-11-21
Sampling location
Uganda
Isolate name
BX4.11_33_E2_F-Pan_Nairo_F

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession L
NCBI release date
2026-10-04

Host

Host

Submission details

Submission ID
PZ713916.1.L
Submitting group
Date submitted
2026-10-05 08:37:42 UTC
Date released
2026-10-05 08:38:02 UTC
Earliest release date
2026-10-04

Files

Annotations

Alignment and QC

Length L
408 (3.34%)
# of SNPs L
89
# of unknown bases L
3

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • A1021G
  • C1024T
  • C1036G
  • G1046T
  • T1048C
  • C1051T
  • G1061C
  • A1064C
  • A1066T
  • A1069G
  • T1075C
  • A1076G
  • G1081T
  • C1082T
  • G1096A
  • G1106C
  • C1111T
  • A1120G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

RdRp

  • RdRp:A324S
  • RdRp:G329R
  • RdRp:I330L
  • RdRp:M334V
  • RdRp:Q335H
  • RdRp:D344H
  • RdRp:S349A
  • RdRp:N362M
  • RdRp:K382N
  • RdRp:K386N
  • RdRp:A399S
  • RdRp:R401T
  • RdRp:C408W
  • RdRp:S409V
  • RdRp:Q415H
  • RdRp:I416V
  • RdRp:N417T
  • RdRp:L419V
Deletions
N/A
Insertions
N/A

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