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PPD_00T2UQU.1

India/PPD_00T2UQU.1/2025-09-20
K. Sarmah, R. Hazarika, A. Sharma, R. Barman, K. Chamuah, P. Pritam & M. Teronpi

Gauhati Medical College, Microbiology

Sample details

Collection date
2025-09-20
Sampling location
India
Isolate name
CHIKV/Assam/201/2025/GMCH

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
II-ECSA

INSDC

INSDC accession
NCBI release date
2026-03-10
NCBI update date
2026-03-10

Host

Host

Submission details

Submission ID
PX754446.1
Submitting group
Date submitted
2026-10-02 14:51:33 UTC
Date released
2026-10-02 15:09:14 UTC
Earliest release date
2026-03-10

Files

Annotations

Alignment and QC

Length
297 (2.51%)
# of SNPs
9

Nucleotide mutations

Mutations called relative to the NC_004162.2 reference

Substitutions
  • T10254C
  • C10272T
  • A10299G
  • C10377T
  • T10434C
  • T10449C
  • T10512C
  • T10539C
  • G10540A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_004162.2 reference

Substitutions

E1

  • E1:D183N
Deletions
N/A
Insertions
N/A

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