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PPD_00SUT2N.1

Chile/1918/2022-12-22
J. Angulo, H. Ramos, E. Fuentes-Luppichini & M. Ferres

Pontificia Universidad Catolica de Chile, Area de biomedicina

Sample details

Collection date
2022-12-22
Sampling location
Chile (Region de Aysen del General Carlos Ibanez del Campo)
Isolate name
1918

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession M
INSDC accession S
NCBI release date
2026-09-30

Host

Host

Submission details

Submission ID
PX095415.1.M/PX101724.1.S
Submitting group
Date submitted
2026-10-01 08:01:03 UTC
Date released
2026-10-01 08:01:56 UTC
Earliest release date
2026-09-30

Alignment and QC

Length M
3660 (99.7%)
# of SNPs M
131
# of inserted bases M
1
Length S
1858 (99.2%)
# of SNPs S
54
# of inserted bases S
4
# of deleted bases S
2

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

M

  • T74C
  • G114A
  • C174T
  • A264G
  • C273T
  • G339A
  • T372A
  • C408T
  • T414C
  • T462C
  • A468G
  • G495A
  • A507G
  • T508C
  • A525T
  • C624T
  • T643C
  • G651A

S

  • G63A
  • G66A
  • A240G
  • T396C
  • T421C
  • G477A
  • G489A
  • G504A
  • G510A
  • C570T
  • C576T
  • T591C
  • G597A
  • A618G
  • C621T
  • A714G
  • C723T
  • G756A
Deletions

S

1486, 1697
Insertions

M

ins_3601:A

S

ins_1556:T, ins_1631:TTT

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:V8A
  • GPC:H294Y
  • GPC:V346I
  • GPC:I361V
  • GPC:I537V

Gn

  • Gn:V8A
  • Gn:H294Y
  • Gn:V346I
  • Gn:I361V
  • Gn:I537V

NSs

  • NSs:Q40R
Deletions
N/A
Insertions
N/A

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