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PPD_00SUR9A.1

USA/MN-MDH-RSVB-04853/2026-06-13
J. Garfin, M. Plumb, K. Pung, A. Mondelli, B. Weber, H. D. Kunerth, D. Evans, L. Bohnker-Voels, M. Anacker, J. Jencks & S. Namugenyi

Minnesota Department of Health Infectious Disease Laboratory Submission Group, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-06-13
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04853

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-09-30
NCBI update date
2026-09-30
Raw reads accession

Host

Host

Submission details

Submission ID
QB057343.1
Submitting group
Date submitted
2026-10-01 05:40:57 UTC
Date released
2026-10-01 05:41:41 UTC
Earliest release date
2026-09-30

Files

Annotations

Alignment and QC

Length
15141 (94.8%)
# of SNPs
136
# of inserted bases
5
# of deleted bases
2
# of unknown bases
706

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • C116T
  • T498C
  • G513T
  • G579A
  • C998A
  • T1180C
  • C1687T
  • G1732A
  • T1753C
  • T1762C
  • T1846C
  • A1933T
  • C2074T
  • C2198T
  • C2365T
  • C2554T
  • C2691T
  • T2781C
Deletions
973, 4588
Insertions
ins_7408:A, ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:V103G
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:K103N
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:V179A
  • L:K570R
  • L:L1031I
  • L:S1723C
  • L:E1738K
  • L:R1759K
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:N42S
  • M2-2:C49F
Deletions
N/A
Insertions
N/A

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