This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

PPD_00SU851.1

USA/PPD_00SU851.1/2026-06-04
P. Dykema, N. Hanson, Q. Yang, D. Lucas, S. Jr. Grimmet, J. Johnson & K. Waterman

Washington State Department of Health Public Health Labs, Division of Disease Control and Statistics

Sample details

Collection date
2026-06-04
Sampling location
USA (Washington,Benton)
Isolate name
WNV/USA/WAPHL-951042/2026

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
1A

INSDC

INSDC accession
BioProject accession
NCBI release date
2026-09-28
NCBI update date
2026-09-28

Host

Host

Submission details

Submission ID
PZ754492.1
Submitting group
Date submitted
2026-09-29 06:01:04 UTC
Date released
2026-09-29 06:01:41 UTC
Earliest release date
2026-09-28

Files

Annotations

Alignment and QC

Length
10736 (97.8%)
# of SNPs
99
# of deleted bases
51

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • G43C
  • C246T
  • A491G
  • C600T
  • A630G
  • C660T
  • G792A
  • C1119T
  • A1320G
  • A1333G
  • T1442C
  • C1465T
  • C2067T
  • A2097C
  • T2103C
  • C2200T
  • A2229G
  • C2448T
Deletions
10417-10429, 10609-10646
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS1

  • NS1:L153V

NS2A

  • NS2A:R188K

NS3

  • NS3:T356I

NS4A

  • NS4A:R41K
  • NS4A:A85T

NS5

  • NS5:K314R

env

  • env:T123A
  • env:V159A
  • env:L167F
  • env:L412F

prM

  • prM:K9R
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue