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Democratic_Republic_of_the_Congo/seq0008/2022-09-30
E. Kinganda Lusamaki, A. Amuri Aziza, G. Luakanda Ndelemo, E. Hasivirwe Vakaniaki, N. Fernandez Nunez, C. B. Pratt, P. Akil Bandali, J.-C. Makangara Cigolo, N. A. Hoff, S. Sabiti Nundu, N. Mulopo Mukanya, M. Ngimba, B. Modrada Madakpa, R. Diavita, P. Paku Tshambu, E. Pukuta Simbu, S. Merritt, A. O'Toole, N. Low, A. Nkuba Ndaye, H. Kavunga Membo, R. Shongo, E. Malembi, T. Kalonji, ..., S. Ahuka Mundeke

Institut National de Recherche Biomedicale, Pathogen Genomic Laboratory

Sample details

Collection date
2022-09-30
Sampling location
Democratic Republic of the Congo

Data use terms

Data use terms
OPEN

Outbreak

Outbreak
Ebov-2020

Submission details

Submission ID
seq0008
Date submitted
2026-09-23 14:42:42 UTC
Date released
2026-09-23 14:42:49 UTC
Earliest release date
2026-09-23

Files


Alignment and QC

Length
18943 (99.9%)
# of SNPs
254
# of inserted bases
1

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions
  • T160C
  • C180T
  • C230T
  • C280T
  • G360T
  • G381A
  • A388G
  • A491G
  • G500A
  • A619G
  • A622G
  • C856T
  • C1094T
  • T1156C
  • C1198T
  • G1420A
  • T1540C
  • A1687G
Deletions
N/A
Insertions
ins_18282:A

Amino acid substitutions

Substitutions called relative to the NC_002549.1 reference

Substitutions

GP

  • GP:V310A
  • GP:G314R
  • GP:S377P
  • GP:L378P
  • GP:A417T
  • GP:S422P
  • GP:P430L
  • GP:S440G
  • GP:F443L
  • GP:S475G
  • GP:S476G
  • GP:I544T

L

  • L:V79I
  • L:E130D
  • L:P342S
  • L:I1183L
  • L:S1383N
  • L:R1405Q
  • L:A1517V
  • L:F1610P
  • L:S1720C
  • L:F1742S
  • L:S1747T
  • L:D1888N
  • L:E2051D

NP

  • NP:I8V
  • NP:A11T
  • NP:I517T
  • NP:I527T
  • NP:T536A
  • NP:A540T
  • NP:T557I
  • NP:S644P

VP24

  • VP24:M212K

VP35

  • VP35:D18N
  • VP35:N204D

VP40

  • VP40:A202V
Deletions
N/A
Insertions
N/A

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