accessionVersion	accession	version	submissionId	isRevocation	submitter	groupName	groupId	submittedAtTimestamp	submittedDate	releasedAtTimestamp	releasedDate	dataUseTerms	dataUseTermsRestrictedUntil	dataBecameOpenAt	dataUseTermsUrl	versionStatus	versionComment	pipelineVersion	ampliconPcrPrimerScheme	ampliconSize	anatomicalMaterial	anatomicalPart	assemblyReferenceGenomeAccession	authorAffiliations	authors	bioprojectAccession	biosampleAccession	bodyProduct	breadthOfCoverage	cellLine	collectionDevice	collectionMethod	comment	completeness	consensusSequenceSoftwareName	consensusSequenceSoftwareVersion	cultureId	dehostingMethod	depthOfCoverage	diagnosticMeasurementMethod	diagnosticMeasurementUnit	diagnosticMeasurementValue	diagnosticTargetGeneName	diagnosticTargetPresence	displayName	earliestReleaseDate	environmentalMaterial	environmentalSite	experimentalSpecimenRoleType	exposureDetails	exposureEvent	exposureSetting	foodProduct	foodProductProperties	frameShifts	gcaAccession	geoLocAdmin1	geoLocAdmin2	geoLocCity	geoLocCountry	geoLocLatitude	geoLocLongitude	geoLocSite	hostAge	hostAgeBin	hostDisease	hostGender	hostHealthOutcome	hostHealthState	hostNameCommon	hostNameScientific	hostOriginCountry	hostRole	hostTaxonId	hostVaccinationStatus	insdcAccessionBase	insdcAccessionFull	insdcRawReadsAccession	insdcVersion	isLabHost	length	lineage	ncbiReleaseDate	ncbiSourceDb	ncbiSubmitterCountry	ncbiUpdateDate	ncbiVirusName	ncbiVirusTaxId	pairedEndInsertSize	passageMethod	passageNumber	presamplingActivity	previousInfectionDisease	previousInfectionOrganism	purposeOfSampling	purposeOfSequencing	qualityControlDetails	qualityControlDetermination	qualityControlIssues	qualityControlMethodName	qualityControlMethodVersion	rawSequenceDataProcessingMethod	sampleCollectionDate	sampleCollectionDateRangeLower	sampleCollectionDateRangeUpper	sampleReceivedDate	sampleType	sequencedByContactEmail	sequencedByContactName	sequencedByOrganization	sequencingAssayType	sequencingDate	sequencingInstrument	sequencingLibrarySelection	sequencingLibrarySource	sequencingProtocol	signsAndSymptoms	specimenCollectorSampleId	specimenProcessing	specimenProcessingDetails	stopCodons	totalAmbiguousNucs	totalDeletedNucs	totalFrameShifts	totalInsertedNucs	totalSnps	totalStopCodons	totalUnknownNucs	travelHistory	rawReads
PPD_00ST6RY.1	PPD_00ST6RY	1	seq2	false	m_marcacci	IZSAM_team	1189	1790170465	2026-09-23	1790170476	2026-09-23	OPEN		2026-09-23	https://pathoplexus.org/about/terms-of-use/open-data	LATEST_VERSION		29	WNVUS1	400bp				Grubaugh Lab, Yale University, CT, USA	Feriancek, Nicole M.; Breban, Mallery I.; Bourgikos, Ellie; Bransfield, Angela; Armstrong, Philip M.; Vogels, Chantal B. F.; Grubaugh, Nathan D.						Mosquitos trapped using Gravid Trap	mosquito trapping		0.9898449542116239	iVar	v1.3.1			10						USA/seq2/2019-09-11	2026-09-23														USA																					10916	1A													surveillance for arboviruses					iVar trim	v1.3.1	iVar v1.3.1	2019-09-11	2019-09-11	2019-09-11		pooled blended mosquitoes		Nicole M Feriancek	Grubaugh Lab, Yale University, CT, USA		2024-02-19				COVIDSeq protocol (primers switched)				Sample consisted of 13 whole, blended mosquitoes from a given trap pooled in groups of up to 50 by species and date		0	1	0	0	90	0	0