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PPD_00SSYWY.1

Democratic_Republic_of_the_Congo/21BTB724/2021-03-01
D. Mukadi-Bamuleka, A. Amuri-Aziza, M. Ngimba, B. Modadra, G. Luakanda - Ndelemo, P. Akil-Bandali, F. Muyembe-Mawete, F. Edidi - Atani, J.-C. Makangara-Cigolo, C. Muswamba-Kayembe, P. Paku-Tshambu, A. Citenga, E. Lokilo-Lofiko, O. Rilia, S. Kimbonza, E. Pukuta, G. Kabamba -Lungenyi, R. Lumembe-Numbi, C. Pratt, T. Wawina-Bokalanga, E. Kinganda-Lusamaki, D. Mumba - Ngoyi, J.-J. Muyembe-Tamfum, S. Ahuka-Mundeke & P. Mbala-Kingebeni

Institut National de Recherche Biomedicale, Kinshasa, Kinshasa

Sample details

Collection date
2021-03-01
Sampling location
Democratic Republic of the Congo (Nord-Kivu)
Isolate name
21BTB724

Data use terms

Data use terms
OPEN
Data use terms URL

Outbreak

Outbreak
Ebov-2018b/r2021a

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-09-12
NCBI update date
2026-09-13

Host

Host

Submission details

Submission ID
OZ556703.1
Submitting group
Date submitted
2026-09-15 02:30:47 UTC
Date released
2026-09-15 02:30:58 UTC
Earliest release date
2026-09-12

Alignment and QC

Length
18562 (86.5%)
# of SNPs
257
# of inserted bases
6
# of deleted bases
2
# of unknown bases
2158
# of frame shifts
3
Frame shifts
GP:135-677(nt:6439-6923;6923-8068),sGP:135-365(nt:6439-7133),ssGP:135-298(nt:6439-6922;6924-6933)

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions
  • C339T
  • G381A
  • A388G
  • T445A
  • A491G
  • C493T
  • G500A
  • G507A
  • A547G
  • C559T
  • A607C
  • A619G
  • G673A
  • C751T
  • C775T
  • A931C
  • C973T
  • C1072T
Deletions
6438, 18472
Insertions
ins_18632:TCCTTA

Amino acid substitutions

Substitutions called relative to the NC_002549.1 reference

Substitutions

GP

  • GP:V3A
  • GP:V75A

L

  • L:V79I
  • L:E130D
  • L:Q133H
  • L:V229I
  • L:T233N
  • L:S428N
  • L:F1610L
  • L:R1657G
  • L:R1681S
  • L:Q1793R
  • L:I1824M
  • L:R1914K
  • L:T2028M
  • L:C2050S
  • L:E2051D

NP

  • NP:I8V
  • NP:A11T
  • NP:S13N
  • NP:V459I
  • NP:N478S
  • NP:T503I
  • NP:D576Y
  • NP:T579A
  • NP:S644P

VP24

  • VP24:K15Q
  • VP24:T34A
  • VP24:K163Q
  • VP24:I181L
  • VP24:M212K

VP35

  • VP35:A13V
  • VP35:A180T
  • VP35:N204D

VP40

  • VP40:N23K
  • VP40:G29S
  • VP40:T255A
  • VP40:T277N

sGP

  • sGP:V3A
  • sGP:V75A

ssGP

  • ssGP:V3A
  • ssGP:V75A
Deletions

GP

GP:134

sGP

sGP:134

ssGP

ssGP:134
Insertions
N/A

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