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PPD_00SSYS6.1

Democratic_Republic_of_the_Congo/21BEN033/2021-10-10
A. Amuri-Aziza, E. Lokilo-Lofiko, G. Luakanda - Ndelemo, P. Akil-Bandali, F. Muyembe-Mawete, F. Edidi - Atani, J.-C. Makangara-Cigolo, C. Muswamba-Kayembe, P. Paku-Tshambu, A. Citenga, O. Rilia, S. Kimbonza, E. Pukuta, D. Mukadi-Bamuleka, G. Kabamba -Lungenyi, R. Lumembe-Numbi, C. Pratt, T. Wawina-Bokalanga, E. Kinganda-Lusamaki, D. Mumba - Ngoyi, J.-J. Muyembe-Tamfum, S. Ahuka-Mundeke & P. Mbala-Kingebeni

Institut National de Recherche Biomedicale, Kinshasa, Kinshasa

Sample details

Collection date
2021-10-10
Sampling location
Democratic Republic of the Congo (Nord-Kivu)
Isolate name
21BEN033

Data use terms

Data use terms
OPEN
Data use terms URL

Outbreak

Outbreak
Ebov-2018b/r2021b

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-09-12
NCBI update date
2026-09-13

Host

Host

Submission details

Submission ID
OZ556698.1
Submitting group
Date submitted
2026-09-15 02:30:47 UTC
Date released
2026-09-15 02:30:58 UTC
Earliest release date
2026-09-12

Alignment and QC

Length
18821 (99.2%)
# of SNPs
310
# of inserted bases
6
# of deleted bases
1

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions
  • A214G
  • C230T
  • T246C
  • C339T
  • G381A
  • A388G
  • T445A
  • A491G
  • C493T
  • G500A
  • G507A
  • A547G
  • C559T
  • A607C
  • A619G
  • C751T
  • C775T
  • A931C
Deletions
18404
Insertions
ins_18632:TCCTTA

Amino acid substitutions

Substitutions called relative to the NC_002549.1 reference

Substitutions

GP

  • GP:V3A
  • GP:V75A
  • GP:F248L
  • GP:V310A
  • GP:L368P
  • GP:S377P
  • GP:S422P
  • GP:P429A
  • GP:A432T
  • GP:T435A
  • GP:F443L
  • GP:E457K
  • GP:K478R
  • GP:I544T

L

  • L:V79I
  • L:E130D
  • L:Q133H
  • L:T233N
  • L:S428N
  • L:E539K
  • L:S1383N
  • L:V1597A
  • L:F1610L
  • L:R1657G
  • L:R1681S
  • L:N1739S
  • L:F1742S
  • L:G1753S
  • L:Q1793R
  • L:I1824M
  • L:R1914K
  • L:T2028M
  • L:C2050S
  • L:E2051D

NP

  • NP:I8V
  • NP:A11T
  • NP:S13N
  • NP:V459I
  • NP:N478S
  • NP:T503I
  • NP:I517T
  • NP:T522A
  • NP:I527T
  • NP:A540D
  • NP:N547H
  • NP:D548N
  • NP:S644P

VP24

  • VP24:K15Q
  • VP24:T34A
  • VP24:K163Q
  • VP24:M212K

VP35

  • VP35:A13V
  • VP35:Y55H
  • VP35:A56V
  • VP35:Q61K
  • VP35:I78M
  • VP35:A180T
  • VP35:N204D

VP40

  • VP40:N23K
  • VP40:G29S
  • VP40:T255A
  • VP40:T277N

sGP

  • sGP:V3A
  • sGP:V75A
  • sGP:F248L
  • sGP:G331V
  • sGP:L336P

ssGP

  • ssGP:V3A
  • ssGP:V75A
  • ssGP:F248L
Deletions
N/A
Insertions
N/A

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