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PPD_00SSQE5.1
Download
Download FASTA
Download metadata TSV
Australia/PPD_00SSQE5.1/2026-06-03
X. Dong,
S. Edwards,
Y. M. Deng,
I. Barr,
A. Hirankitti &
C. Dapat
WHO Collaborating Centre for Reference and Research on Influenza, Melbourne, Victoria
Sample details
Collection date
2026-06-03
Sampling location
Australia (Northern Territory; Darwin)
Isolate name
hRSV/A/Australia/NT-RDH-0229/2026
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.3.1
INSDC
INSDC accession
OZ546903.1
BioProject accession
PRJEB98192
BioSample accession
SAMEA123437389
NCBI release date
2026-09-10
NCBI update date
2026-09-10
Submission details
Submission ID
OZ546903.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-09-11 05:11:49 UTC
Date released
2026-09-11 05:11:57 UTC
Earliest release date
2026-09-10
Alignment and QC
Length
15097 (99.1%)
# of SNPs
247
# of inserted bases
4
# of deleted bases
3
# of unknown bases
1
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
T
66
A
A
67
G
C
90
T
C
183
T
A
262
G
G
587
T
C
589
T
C
691
T
T
844
A
C
871
T
T
988
C
T
989
C
C
1012
T
G
1034
A
G
1050
A
G
1077
A
T
1359
C
G
1368
A
Show more
Deletions
3214, 3215, 4592
Insertions
ins_0:TTGC
Amino acid substitutions
Substitutions called relative to the
PP109421.1
reference
Substitutions
F
F:
P
4
S
F:
T
12
I
F:
L
20
F
F:
S
276
N
G
G:
P
71
L
G:
H
90
Y
G:
L
101
S
G:
T
113
I
G:
V
131
D
G:
I
134
K
G:
R
151
H
G:
N
178
G
G:
G
224
E
G:
V
225
A
G:
T
228
N
G:
P
230
T
G:
P
234
Q
G:
S
243
I
G:
S
250
F
G:
H
258
Q
G:
K
262
E
G:
E
263
K
Show more
L
L:
S
100
L
L:
P
171
L
L:
R
256
K
L:
Y
598
H
L:
L
835
M
L:
I
884
V
L:
H
1022
L
L:
L
1438
Q
L:
I
1523
V
L:
K
1663
T
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
C
1733
Y
M2-1
M2-1:
S
176
P
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
M2-2:
I
46
L
M2-2:
T
77
A
N
N:
E
122
D
N:
V
352
A
NS1
NS1:
I
65
V
P
P:
L
55
P
P:
N
64
S
P:
T
92
M
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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