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PPD_00SRMZ5.1

Democratic_Republic_of_the_Congo/26FHV046/2026-05-03
G. Luakanda-Ndelemo, A. Amuri-Aziza, D. Jansen, R. Ola-Mpumbe, P. Paku-Tshambu, E. Kinganda-Lusamaki, P. Adroba-Tandele, P. Akil-Bandali, M. Lola-Loway, B. Djemba-Fundji, F. Cikaya-Kankolongo, P. Muswamba-Kayembe, R. Lumembe-Numbi, N. Mapenzi-Kashali, J. Tete-Sitra, J. Makangara-Cigolo, S. Kimbonza, S. Wilkinson, J. Quick, A. Citenga, O. Ntumba-Tshitenge, N. Gumede, E. Lokilo-Lofiko, D. Mukadi, ..., P. Mbala-Kingebeni

Institut National de Recherche Biomedicale, Kinshasa, Kinshasa

Outbreak

Amino acid substitutions from outbreak clade founder
  • L:I1681T
Outbreak
Bdbv-2026

Sample details

Collection date
2026-05-03
Sampling location
Democratic Republic of the Congo (Ituri; Rwampara)
Isolate name
26FHV046

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-08-27
NCBI update date
2026-08-28

Host

Host

Submission details

Submission ID
OZ538122.1
Submitting group
Date submitted
2026-09-01 09:30:30 UTC
Date released
2026-09-01 09:31:33 UTC
Earliest release date
2026-08-27

Alignment and QC

Length
18812 (98.6%)
# of SNPs
213
# of inserted bases
1
# of unknown bases
140

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C135T
  • C261T
  • A266G
  • C530T
  • T586C
  • G832A
  • C1018T
  • A1066G
  • T1375C
  • T1405C
  • C1675A
  • C1702T
  • T1774G
  • G1924A
  • A1943G
  • A1954G
  • A2007G
  • G2027A
Deletions
N/A
Insertions
ins_18902:A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:Y151F
  • GP:E188K
  • GP:P365S
  • GP:P367L
  • GP:Y387H
  • GP:P389L
  • GP:R394G
  • GP:P481L
  • GP:T486I
  • GP:A489V
  • GP:R506S

GP_003

  • GP_003:Y151F
  • GP_003:E188K
  • GP_003:T320I
  • GP_003:P328L
  • GP_003:Q367*

L

  • L:V402I
  • L:L1011F
  • L:S1323A
  • L:N1342H
  • L:K1570R
  • L:L1595Q
  • L:I1664R
  • L:I1681T
  • L:K1738N
  • L:Q1770R
  • L:N1771D
  • L:I1784V
  • L:R1954G
  • L:E1969D
  • L:A2191V

NP

  • NP:N496D
  • NP:Q517R
  • NP:G524S
  • NP:V531A
  • NP:R537K
  • NP:V544I
  • NP:D546N
  • NP:A569V

VP24

  • VP24:S24N

VP30

  • VP30:H5Y

VP35

  • VP35:N79S
  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:A31S
Deletions
N/A
Insertions
N/A

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