This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

PPD_00SR1Q9.1

Indonesia/ZIKV-85987/2026-03-23
C. Darles, J.-S. Driouich, R. Klitting, N. Ayhan, G. Durand, G. Grard, L. Luciani, L. Ninove, C. Zandotti, A. Nougairede, P. Lavrard-Meyer, M.-P. Otto, E. Valero, F. Jourdain, X. de Lamballerie, L. Pezzi, F. Janvier, G. Piorkowski, R. Amaral, M. Peden, L. Bosio, M. Geulen & T. Canivez

CNR Arbovirus, CNR Arbovirus

Sample details

Collection date
2026-03-23
Sampling location
Indonesia
Isolate name
ZIKV-85987

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2026-05-16
NCBI update date
2026-05-16

Host

Host

Submission details

Submission ID
PZ384978.1
Submitting group
Date submitted
2026-08-28 15:00:59 UTC
Date released
2026-08-28 15:03:29 UTC
Earliest release date
2026-05-16

Alignment and QC

Length
10447 (95.1%)
# of SNPs
158
# of unknown bases
171

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • A254G
  • C449T
  • C503T
  • A523G
  • T558C
  • G560A
  • T578C
  • C614A
  • G653A
  • T1019C
  • T1058C
  • T1067C
  • C1073T
  • A1175G
  • C1190T
  • T1241A
  • C1340T
  • G1346A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

NS1

  • NS1:E146K
  • NS1:A233T
  • NS1:V349M

NS2A

  • NS2A:I154V
  • NS2A:G187R
  • NS2A:K188R

NS3

  • NS3:V258I
  • NS3:H584Y

NS4B

  • NS4B:T25N
  • NS4B:I26M
  • NS4B:I240T

NS5

  • NS5:Y74S
  • NS5:V114M
  • NS5:P139S
  • NS5:T229I
  • NS5:V267A
  • NS5:K560R
  • NS5:D703E

pr

  • pr:N17S

prM

  • prM:N17S
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue