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PPD_00SR1FU.1

Seychelles/CNR.ZIKV/2024-08
N. Ayhan, L. Pezzi, R. Klitting, G. A. Durand, G. Grard & X. de Lamballerie

Inserm 1207 Faculte de Medecine de Marseille 27, Unite des Virus Emergents UMR I90

Sample details

Collection date
2024-08
Sampling location
Seychelles
Isolate name
CNR.ZIKV

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2025-04-08
NCBI update date
2025-04-08

Host

Host

Submission details

Submission ID
PV426612.1
Submitting group
Date submitted
2026-08-28 15:00:59 UTC
Date released
2026-08-28 15:03:29 UTC
Earliest release date
2025-04-08

Alignment and QC

Length
10141 (93.8%)
# of SNPs
186

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • A254G
  • T299C
  • G423A
  • C482T
  • T510C
  • A523G
  • T558C
  • G584A
  • G653A
  • T719C
  • T773C
  • A803G
  • T837C
  • T872C
  • A884G
  • A914G
  • A953G
  • C954T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

E

  • E:T179I
  • E:A280T

M

  • M:I67M

NS1

  • NS1:V84I
  • NS1:E146K
  • NS1:L154I
  • NS1:A233T
  • NS1:V349M

NS4B

  • NS4B:I240T

NS5

  • NS5:Y74H
  • NS5:V114M
  • NS5:I282V
  • NS5:I322V

ancC

  • ancC:A106T

pr

  • pr:Y13H
  • pr:N17S

prM

  • prM:Y13H
  • prM:N17S
  • prM:I160M
Deletions
N/A
Insertions
N/A

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