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PPD_00SQWHW.1

Haiti/PPD_00SQWHW.1/2021-12-02
T. L. Moquin, R. Louis, J. G. Jr. Morris & J. A. Lednicky

University of Florida - Gainesville, Environmental and Global Health

Sample details

Collection date
2021-12-02
Sampling location
Haiti
Isolate name
Zika virus/human/Haiti/36/2021

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2024-02-14
NCBI update date
2024-02-14

Host

Host

Submission details

Submission ID
PP316140.1
Submitting group
Date submitted
2026-08-28 15:00:59 UTC
Date released
2026-08-28 15:03:29 UTC
Earliest release date
2024-02-14

Alignment and QC

Length
10808 (100%)
# of SNPs
35

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • A254G
  • T548C
  • G923A
  • C1313T
  • C1616T
  • C2375T
  • G2681A
  • T2724C
  • T2853C
  • G2925A
  • G3059A
  • A3140G
  • T3158C
  • G3186A
  • T3218A
  • G3332A
  • G3534A
  • C3731T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

NS1

  • NS1:Y122H
  • NS1:E146K
  • NS1:A233T
  • NS1:V349M

NS3

  • NS3:H355Y

NS4B

  • NS4B:I26M
  • NS4B:I176M
  • NS4B:I240T
Deletions
N/A
Insertions
N/A

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