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PPD_00SQUKU.1

Mexico/138Mn.CIRUADY/2023-05
A. B. Yeh-Gorocica, A. Rivero Juarez & M. A. Torres-Castro

Universidad Autonoma de Yucatan, Zoonosis

Sample details

Collection date
2023-05
Sampling location
Mexico (Yucatan, Tekax)
Isolate name
138Mn.CIRUADY

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2023-11-22
NCBI update date
2023-11-22

Host

Host

Submission details

Submission ID
OR787467.1
Submitting group
Date submitted
2026-08-28 15:00:59 UTC
Date released
2026-08-28 15:02:26 UTC
Earliest release date
2023-11-22

Alignment and QC

Length
153 (1.42%)
# of SNPs
14

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • T9142A
  • T9144C
  • T9145A
  • G9146C
  • A9148T
  • G9150A
  • A9157G
  • G9166T
  • G9167A
  • T9221C
  • C9240T
  • A9266T
  • T9275C
  • T9278C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

NS5

  • NS5:F492Y
  • NS5:L493H
  • NS5:N494I
  • NS5:E495K
  • NS5:H497R
  • NS5:G500V
  • NS5:R525C
Deletions
N/A
Insertions
N/A

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