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PPD_00SQTPM.1

Thailand/AB4398/2023-01-28
S. Khongwichit, W. Chuchaona, S. Vongpunsawad & Y. Poovorawan

Chulalongkorn University, Pediatrics, Faculty of Medicine

Sample details

Collection date
2023-01-28
Sampling location
Thailand
Isolate name
AB4398

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2023-11-02
NCBI update date
2023-11-02

Host

Host

Submission details

Submission ID
OR264638.1
Submitting group
Date submitted
2026-08-28 15:00:59 UTC
Date released
2026-08-28 15:02:26 UTC
Earliest release date
2023-11-02

Alignment and QC

Length
10569 (97.8%)
# of SNPs
164

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • T227C
  • A254G
  • A272G
  • T434C
  • G455A
  • A523G
  • T558C
  • G653A
  • C713T
  • A728G
  • A803G
  • A815G
  • C896T
  • G945A
  • T962C
  • T1019C
  • T1064C
  • T1115C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

E

  • E:A280T

M

  • M:V65I

NS1

  • NS1:V93I
  • NS1:E146K
  • NS1:A233T
  • NS1:V349M

NS3

  • NS3:H584Y

NS4B

  • NS4B:A24V
  • NS4B:I98M
  • NS4B:I240T

NS5

  • NS5:V114M
  • NS5:V374I

pr

  • pr:N17S

prM

  • prM:N17S
  • prM:V158I
Deletions
N/A
Insertions
N/A

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