This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

PPD_00SQQPQ.1

India/ZT32/2021-07-11
N. Pradeep Kumar, M. Ajithlal P, P. Saini & A. Kumar

Vector Control Research Centre (ICMR), VCRC Field Station

Sample details

Collection date
2021-07-11
Sampling location
India (Thiruvananthapuram, Kerala)
Isolate name
ZT32

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2023-11-01
NCBI update date
2023-11-01

Host

Host

Submission details

Submission ID
OP678999.1
Submitting group
Date submitted
2026-08-28 15:00:59 UTC
Date released
2026-08-28 15:02:26 UTC
Earliest release date
2023-11-01

Alignment and QC

Length
725 (6.71%)
# of SNPs
14

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • A7964G
  • A7973G
  • G8007A
  • A8018G
  • C8063T
  • T8069C
  • A8213G
  • C8303T
  • T8408C
  • C8474T
  • T8504C
  • T8588C
  • A8591G
  • C8606T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

NS5

  • NS5:V114M
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue