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PPD_00SQN7R.1

Mexico/584/2021-09-16
A. P. Rodriguez-Maldonado, C. E. Wong-Arambula, D. Duran-Ayala, C. Fuentes-Cuevas, Mdl. L. Torres-Rodriguez, S. V. Rivero-Arredondo, S. Serrano-Gutierrez, M. Aparicio-Antonio, C. Rosales-Jimenez, J. C. del Mazo-Lopez, L. Hernandez-Rivas, I. Lopez-Martinez, J. E. Ramirez-Gonzalez & M. Vazquez-Pichardo

Secretaria de Salud, InDRE

Sample details

Collection date
2021-09-16
Sampling location
Mexico (Morelos)
Isolate name
584

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2022-03-02
NCBI update date
2022-03-02

Host

Host

Submission details

Submission ID
OM522327.1
Submitting group
Date submitted
2026-08-28 15:00:59 UTC
Date released
2026-08-28 15:02:26 UTC
Earliest release date
2022-03-02

Alignment and QC

Length
10806 (100%)
# of SNPs
81

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • A254G
  • G420A
  • G536A
  • T635C
  • C806T
  • C878T
  • C1070T
  • C1196A
  • C1220T
  • C1568T
  • C1616T
  • A1760G
  • T1850C
  • C2375T
  • G2402A
  • G2507A
  • G2681A
  • T2724C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

NS1

  • NS1:V93A
  • NS1:G100A
  • NS1:E146K
  • NS1:T222A
  • NS1:A233T
  • NS1:V349M

NS2A

  • NS2A:I32V
  • NS2A:I34M

NS3

  • NS3:R169K
  • NS3:M572L

NS4B

  • NS4B:I240T

NS5

  • NS5:G129E
  • NS5:R525C

ancC

  • ancC:G105S
Deletions
N/A
Insertions
N/A

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