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Peru/769/2010
H. Razuri, R. Tokarz, B. M. Ghersi, G. Salmon-Mulanovich, M. C. Guezala, C. Albujar, A. P. Mendoza, Y. O. Tinoco, C. Cruz, M. Silva, A. Vasquez, V. Pacheco, U. Stroher, L. W. Guerrero, D. Cannon, S. T. Nichol, D. L. Hirschberg, W. I. Lipkin, D. G. Bausch & J. M. Montgomery

Columbia University, Center for Infection and Immunity

Sample details

Collection date
2010
Sampling location
Peru
Isolate name
769

Data use terms

Data use terms
OPEN

INSDC

INSDC accession L
INSDC accession M
INSDC accession S
NCBI release date
2014-03-16

Submission details

Submission ID
KF581136.1.L/KF581135.1.M/KF581134.1.S
Date submitted
2026-08-19 12:26:22 UTC
Date released
2026-08-19 12:28:24 UTC
Earliest release date
2014-03-16

Alignment and QC

Length L
572 (8.72%)
# of SNPs L
129
Length S
1068 (57.1%)
# of SNPs S
178
Length M
1673 (45.5%)
# of SNPs M
326
# of ambiguous bases M
1

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

  • T4259A
  • A4265G
  • A4268T
  • C4289T
  • C4290A
  • G4292A
  • A4294T
  • T4301G
  • A4313T
  • C4316T
  • G4319A
  • A4325T
  • C4326T
  • T4328A
  • T4331G
  • T4337A
  • G4352T
  • G4354A

M

  • T1776C
  • C1779T
  • A1788G
  • A1794G
  • G1795T
  • T1800A
  • C1809A
  • T1810C
  • G1812T
  • C1818T
  • T1825G
  • C1827T
  • A1828G
  • A1836G
  • G1839A
  • A1866G
  • G1869A
  • A1872C

S

  • G66A
  • A90G
  • A111G
  • G120A
  • C172T
  • A183G
  • C184A
  • C188G
  • T202C
  • A219G
  • A222G
  • T225C
  • G231A
  • T244A
  • T262C
  • T306C
  • A312G
  • A321G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:I579M
  • GPC:A582S
  • GPC:S592A
  • GPC:I593V
  • GPC:K610R
  • GPC:K615R
  • GPC:L638I
  • GPC:L639M
  • GPC:C642L
  • GPC:I644L
  • GPC:V645I
  • GPC:I646V
  • GPC:A649V
  • GPC:M656L
  • GPC:S681A
  • GPC:K693R
  • GPC:K700R
  • GPC:S752A

Gc

  • Gc:M5L
  • Gc:S30A
  • Gc:K42R
  • Gc:K49R
  • Gc:S101A
  • Gc:I159V
  • Gc:V181I
  • Gc:V186I
  • Gc:P231T
  • Gc:I262V
  • Gc:E282D
  • Gc:T287A
  • Gc:N288T
  • Gc:I293V
  • Gc:T345V
  • Gc:S353T
  • Gc:M355I
  • Gc:T372A

Gn

  • Gn:I579M
  • Gn:A582S
  • Gn:S592A
  • Gn:I593V
  • Gn:K610R
  • Gn:K615R
  • Gn:L638I
  • Gn:L639M
  • Gn:C642L
  • Gn:I644L
  • Gn:V645I
  • Gn:I646V
  • Gn:A649V

N

  • N:A49G
  • N:L68M
  • N:K120R
  • N:G226S
  • N:D234E
  • N:E238D
  • N:A241S
  • N:A242E
  • N:V252S
  • N:A253P
  • N:S259A
  • N:M263A
  • N:E274D
  • N:I281V
  • N:E297D
  • N:S332A

NSs

  • NSs:D21G
  • NSs:Q23E
  • NSs:E33G
  • NSs:N34S
  • NSs:L35S
  • NSs:G37D
  • NSs:I62T

RdRp

  • RdRp:Y1420F
  • RdRp:S1440N
  • RdRp:Q1442N
  • RdRp:L1514M
  • RdRp:V1519I
  • RdRp:A1526S
  • RdRp:E1555D
  • RdRp:T1593A
Deletions
N/A
Insertions
N/A

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