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PPD_00JYJ4T.1

Democratic_Republic_of_the_Congo/PPD_00JYJ4T.1/2012
C. G. Albarino, T. Shoemaker, M. L. Khristova, J. F. Wamala, J. J. Muyembe, S. Balinandi, A. Tumusiime, S. Campbell, D. Cannon, A. Gibbons, E. Bergeron, B. Bird, K. Dodd, C. Spiropoulou, B. R. Erickson, L. Guerrero, B. Knust, S. T. Nichol, P. E. Rollin, U. Stroher & M. Khristova

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
2012
Sampling location
Democratic Republic of the Congo
Isolate name
EboBund-112 2012

Outbreak

Amino acid substitutions from outbreak clade founder
  • GP:L239P
Outbreak
Bdbv-2012

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2013-05-19
NCBI update date
2013-06-24

Host

Host

Submission details

Submission ID
KC545393.1
Submitting group
Date submitted
2026-08-19 12:25:47 UTC
Date released
2026-08-19 12:28:24 UTC
Earliest release date
2013-05-19

Alignment and QC

Length
18939 (100%)
# of SNPs
252
# of inserted bases
1
# of deleted bases
1

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C213T
  • A266G
  • C439T
  • C530T
  • T643C
  • C646T
  • C1018T
  • A1108G
  • G1288A
  • T1345C
  • T1375C
  • T1453A
  • C1675T
  • T1696C
  • T1861C
  • A1954G
  • A2007G
  • G2027A
Deletions
9568
Insertions
ins_18902:A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:Y151F
  • GP:E188K
  • GP:L239P
  • GP:F310L
  • GP:E345K
  • GP:P365S
  • GP:P367L
  • GP:D368N
  • GP:P389L
  • GP:R394G
  • GP:H452Q
  • GP:T458I
  • GP:P481L
  • GP:T486I
  • GP:A489V

GP_003

  • GP_003:Y151F
  • GP_003:E188K
  • GP_003:L239P
  • GP_003:Q367*

L

  • L:Y116H
  • L:V395I
  • L:V402I
  • L:K1155R
  • L:S1323A
  • L:I1562V
  • L:K1570R
  • L:I1578V
  • L:L1595Q
  • L:D1614G
  • L:I1664R
  • L:D1667N
  • L:R1704I
  • L:Q1715K
  • L:S1716P
  • L:I1720T
  • L:D1772G
  • L:A1778V

NP

  • NP:Q517R
  • NP:G524S
  • NP:V531A
  • NP:D546S
  • NP:S559P
  • NP:S622L

VP24

  • VP24:S24N

VP30

  • VP30:S61F

VP35

  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:S26N
  • VP40:N28S
  • VP40:A31S
Deletions
N/A
Insertions
N/A

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