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PPD_00JVYZU.1

USA/V26004741/2026-04-25
A. Hassan & B. Cherrelle

NJDOH PHEL Virology Shared Submissions, Public Health and Environmental Laboratories, Virology

Sample details

Collection date
2026-04-25
Sampling location
USA (New Jersey)
Isolate name
V26004741

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.3.12

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-08-10
NCBI update date
2026-08-10

Host

Host

Submission details

Submission ID
PZ777359.1
Submitting group
Date submitted
2026-08-12 05:11:15 UTC
Date released
2026-08-12 05:11:27 UTC
Earliest release date
2026-08-10

Alignment and QC

Length
15210 (99.9%)
# of SNPs
225
# of inserted bases
3
# of deleted bases
1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T66A
  • A67G
  • C90T
  • C183T
  • A357G
  • A563G
  • G587T
  • C686T
  • T975C
  • C1012T
  • C1025A
  • G1034A
  • G1050A
  • G1077A
  • A1275G
  • A1341G
  • T1359C
  • G1368A
Deletions
4592
Insertions
ins_0:TGC

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:S276N
  • F:A543T

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:S102F
  • G:T113I
  • G:P126S
  • G:V131D
  • G:I134K
  • G:N178G
  • G:G224E
  • G:P230T
  • G:N242D
  • G:S243I
  • G:S250T
  • G:P256L
  • G:H258Q
  • G:K262E
  • G:I265L

L

  • L:P171L
  • L:A173S
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:E1190D
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:I1734M
  • L:V2129I

M2-1

  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:L179I
  • N:V352A

P

  • P:L55P
  • P:T72N
  • P:T92M

SH

  • SH:L44I
  • SH:V49I
Deletions
N/A
Insertions
N/A

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