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PPD_00JU9EQ.1

USA/RSV-20260706-018/2026-04-09
K. Smith, J. Martinez, C. Wright, H. Yu, B. Bertrand, A. Ramaiah & E. Kersh

GPHL, Bacteriology

Sample details

Collection date
2026-04-09
Sampling location
USA (Georgia)
Isolate name
RSV-20260706-018

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-21
NCBI update date
2026-07-21
Raw reads accession

Host

Host

Submission details

Submission ID
PZ668839.1
Submitting group
Date submitted
2026-07-22 05:40:53 UTC
Date released
2026-07-22 05:41:13 UTC
Earliest release date
2026-07-21

Alignment and QC

Length
15184 (97.7%)
# of SNPs
151
# of inserted bases
6
# of deleted bases
2
# of unknown bases
308

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • A134G
  • A473G
  • G513T
  • G579A
  • C688T
  • T707C
  • C817T
  • G830A
  • C998A
  • C1223A
  • G1385A
  • T1541C
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
  • A2685T
Deletions
973, 4586
Insertions
ins_15092:ATATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:F166Y
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:Q266L
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:K570R
  • L:R1759K
  • L:V1965I
  • L:T1987I
  • L:Q2166P

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F
  • M2-2:Y83C

N

  • N:H43N
  • N:V97I
  • N:Y149H

NS2

  • NS2:E83K
Deletions
N/A
Insertions
N/A

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