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PPD_00JU9DS.1

USA/RSV-20260706-017/2026-04-13
K. Smith, J. Martinez, C. Wright, H. Yu, B. Bertrand, A. Ramaiah & E. Kersh

GPHL, Bacteriology

Sample details

Collection date
2026-04-13
Sampling location
USA (Georgia)
Isolate name
RSV-20260706-017

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-21
NCBI update date
2026-07-21
Raw reads accession

Host

Host

Submission details

Submission ID
PZ668838.1
Submitting group
Date submitted
2026-07-22 05:40:53 UTC
Date released
2026-07-22 05:41:13 UTC
Earliest release date
2026-07-21

Alignment and QC

Length
15181 (99.1%)
# of SNPs
147
# of inserted bases
4
# of deleted bases
2
# of ambiguous bases
1
# of unknown bases
100

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • A50T
  • A236G
  • T479C
  • G513T
  • G579A
  • C817T
  • C998A
  • C1266T
  • T1354A
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
  • C2691T
  • C2886A
  • G3036C
Deletions
973, 4586
Insertions
ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:T74A
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P140S
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:A269V
  • G:S275P
  • G:Y285H

L

  • L:R73K
  • L:T188M
  • L:I369V
  • L:K570R
  • L:T1737A
  • L:T1744I
  • L:R1759K
  • L:I1849T
  • L:T1987I

M2-1

  • M2-1:I171V

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:K34N
  • M2-2:D35N
  • M2-2:C49F

N

  • N:A57V
  • N:V97I

NS1

  • NS1:I60M
Deletions
N/A
Insertions
N/A

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