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PPD_00JU8LC.1

USA/RSV-20260706-012/2026-05-24
K. Smith, J. Martinez, C. Wright, H. Yu, B. Bertrand, A. Ramaiah & E. Kersh

GPHL, Bacteriology

Sample details

Collection date
2026-05-24
Sampling location
USA (Georgia)
Isolate name
RSV-20260706-012

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.1.10

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-21
NCBI update date
2026-07-21
Raw reads accession

Host

Host

Submission details

Submission ID
PZ668857.1
Submitting group
Date submitted
2026-07-22 05:10:45 UTC
Date released
2026-07-22 05:11:08 UTC
Earliest release date
2026-07-21

Alignment and QC

Length
15087 (99.1%)
# of SNPs
244
# of deleted bases
1
# of ambiguous bases
1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • A67G
  • C90T
  • C183T
  • G198A
  • T246A
  • C379T
  • A399G
  • G551A
  • G555A
  • C604T
  • T659C
  • G664A
  • T697C
  • G1000A
  • C1012T
  • T1035A
  • G1042A
  • C1046A
Deletions
4592
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:S377N

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:A116V
  • G:I134K
  • G:L142S
  • G:P143L
  • G:G224E
  • G:V225A
  • G:P234L
  • G:S243I
  • G:L247P
  • G:K262E
  • G:I265L
  • G:G272D
  • G:Y273H
  • G:P276S
  • G:D284G

L

  • L:R114K
  • L:N143D
  • L:P171L
  • L:S240N
  • L:R256K
  • L:Y598H
  • L:L1438Q
  • L:I1653V
  • L:I1656V
  • L:K1661N
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:N1748S
  • L:S1789F
  • L:Y2163N

M

  • M:M43I

M2-1

  • M2-1:S176P
  • M2-1:T184A

M2-2

  • M2-2:Y24C
  • M2-2:S44N

N

  • N:Y216H
  • N:I303V
  • N:V352A

P

  • P:L55P
  • P:T72I

SH

  • SH:I38S
  • SH:R61Q
Deletions
N/A
Insertions
N/A

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