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PPD_00JTWF3.1

USA/PPD_00JTWF3.1/2026-04-07
S. Green, H. Barbian, K. Kunstman, S. Bobrovska, E. Newcomer, F. Araujo-Perez, G. Balangue, M. Dominguez & E. Hernandez

Regional Innovative Public Health Laboratory, Regional Innovative Public Health Laboratory

Sample details

Collection date
2026-04-07
Sampling location
USA (Illinois)
Isolate name
IL-RIPHL-RSV-023-0222

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
NCBI release date
2026-07-14
NCBI update date
2026-07-14

Host

Host

Submission details

Submission ID
PZ666339.1
Submitting group
Date submitted
2026-07-15 05:41:17 UTC
Date released
2026-07-15 05:42:16 UTC
Earliest release date
2026-07-14

Alignment and QC

Length
14627 (91.9%)
# of SNPs
130
# of deleted bases
2
# of ambiguous bases
1
# of unknown bases
633

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • G513T
  • G579A
  • C606T
  • C874T
  • C998A
  • A1321G
  • G1385A
  • T1723C
  • G1732A
  • T1747C
  • T1846C
  • C2074T
  • C2198T
  • C2554T
  • C2691T
  • C2913T
  • G3036C
  • A3060G
Deletions
973, 4586
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:R209Q
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H
  • G:P304T
  • G:*311Q

L

  • L:N149H
  • L:K570R
  • L:C1732R
  • L:R1759K
  • L:T1987I
  • L:K1991R
  • L:I2016M

M2-2

  • M2-2:I2T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I

NS2

  • NS2:T8I
Deletions
N/A
Insertions
N/A

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