This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

PPD_00JTV7L.1

USA/PPD_00JTV7L.1/2026-04-09
S. Green, H. Barbian, K. Kunstman, S. Bobrovska, E. Newcomer, F. Araujo-Perez, G. Balangue, M. Dominguez & E. Hernandez

Regional Innovative Public Health Laboratory, Regional Innovative Public Health Laboratory

Sample details

Collection date
2026-04-09
Sampling location
USA (Illinois)
Isolate name
IL-RIPHL-RSV-003-0223

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
NCBI release date
2026-07-14
NCBI update date
2026-07-14

Host

Host

Submission details

Submission ID
PZ666297.1
Submitting group
Date submitted
2026-07-15 05:41:17 UTC
Date released
2026-07-15 05:42:16 UTC
Earliest release date
2026-07-14

Alignment and QC

Length
15142 (95.7%)
# of SNPs
151
# of inserted bases
6
# of deleted bases
2
# of unknown bases
567

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • A134G
  • A473G
  • G513T
  • G579A
  • C688T
  • T707C
  • G830A
  • C998A
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2543T
  • C2554T
  • A2685T
  • C2691T
  • A2928G
Deletions
973, 4586
Insertions
ins_15092:ATATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:F166Y
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:Q266L
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:K570R
  • L:R1759K
  • L:V1965I
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F
  • M2-2:Y83C

N

  • N:V97I

NS2

  • NS2:E83K

P

  • P:P80L
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue