This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the
example data
repository. This instance should not be used for analysis.
X
Pathoplexus
Organisms
Measles Virus
SeqSets
News
About
Docs
Login
Pathoplexus
Organisms
Andes Virus [Hantavirus]
Crimean-Congo Hemorrhagic Fever Virus
Dengue Virus
Ebola Bundibugyo
Ebola Sudan
Ebola Zaire
HMPV
Marburg Virus
Measles Virus
Mpox Virus
RSV-A
RSV-B
West Nile Virus
Yellow Fever Virus
SeqSets
News
About
Docs
Login
API docs
Governance
Legal notice
Funding
Contact
Status
Measles Virus
|
Browse data
Submit sequences
Resources
Select organism section
Browse data
Submit sequences
Resources
PPD_00JTSVC.1
Download
Download FASTA
Download metadata TSV
USA/PPD_00JTSVC.1/2026-06-13
E. B. Fox,
J. M. Garrigues &
N. M. Green
Los Angeles County Public Health Lab microbial pathogen submission group, Los Angeles County Public Health Laboratories
Sample details
Collection date
2026-06-13
Sampling location
USA (California)
Isolate name
MVs/California.USA/23.26 [D8]
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Genotype
Genotype
D8
INSDC
INSDC accession
PZ645905.1
NCBI release date
2026-07-14
NCBI update date
2026-07-14
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PZ645905.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-07-15 04:01:28 UTC
Date released
2026-07-15 04:02:32 UTC
Earliest release date
2026-07-14
Alignment and QC
Length
15880 (99.9%)
# of SNPs
514
Nucleotide mutations
Mutations called relative to the
NC_001498.1
reference
Substitutions
A
84
G
G
97
A
G
122
A
T
224
C
A
257
G
G
269
A
A
282
G
G
293
A
G
305
A
C
341
T
A
344
G
G
353
A
G
368
A
A
413
G
T
422
C
T
449
C
C
497
T
C
518
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_001498.1
reference
Substitutions
C
C:
K
78
R
C:
M
139
T
C:
G
181
V
F
F:
G
2
D
F:
A
9
V
F:
F
11
V
H
H:
G
235
E
H:
G
243
E
H:
R
334
Q
H:
N
390
I
H:
Q
391
R
H:
A
400
T
H:
N
416
D
H:
T
446
S
H:
V
451
M
H:
N
481
S
H:
I
564
L
H:
V
608
A
H:
N
615
S
L
L:
P
43
S
L:
A
81
T
L:
T
183
A
L:
H
191
R
L:
K
215
R
L:
I
235
V
L:
A
252
T
L:
P
275
S
L:
F
321
C
L:
E
329
D
L:
L
411
M
L:
K
482
R
L:
L
610
S
L:
Y
613
H
L:
V
632
I
L:
N
641
D
L:
I
650
M
L:
T
652
A
Show more
N
N:
I
59
V
N:
S
144
F
N:
S
298
A
N:
I
406
T
N:
G
434
S
N:
K
441
R
N:
G
443
S
N:
Y
451
N
N:
A
459
S
N:
P
467
L
N:
M
471
T
N:
R
497
K
N:
G
509
S
N:
D
525
E
P
P:
E
54
K
P:
T
92
A
P:
K
195
R
P:
S
219
G
P:
T
223
A
P:
A
244
V
P:
A
269
V
P:
I
282
T
P:
G
303
E
P:
R
355
K
P:
V
414
A
P:
V
446
M
P:
A
459
V
V
V:
E
54
K
V:
T
92
A
V:
K
195
R
V:
S
219
G
V:
T
223
A
V:
G
237
S
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue