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PPD_00JT6GR.1
Download
Download FASTA
Download metadata TSV
DENV-1/Indonesia/PPD_00JT6GR.1/2025-07-24
A. Nagy &
O. Nagy
National Center for Public Health and Pharmacy, National Reference Laboratory for Viral Zoonoses
Sample details
Collection date
2025-07-24
Sampling location
Indonesia (Bali)
Isolate name
5627/2025 D1
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage & Serotype
Lineage
1IV_B
Serotype
DENV-1
INSDC
INSDC accession
PZ602905.1
NCBI release date
2026-07-05
NCBI update date
2026-07-05
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PZ602905.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-07-06 08:02:20 UTC
Date released
2026-07-06 08:03:17 UTC
Earliest release date
2026-07-05
Alignment and QC
Length
10677 (99.5%)
# of SNPs
384
Nucleotide mutations
Mutations called relative to the
NC_001477.1
reference
Substitutions
A
156
G
T
274
C
G
302
A
A
355
G
G
457
A
G
466
A
C
469
T
T
478
C
G
487
A
A
496
G
T
511
C
C
519
T
C
538
T
G
574
A
C
595
T
T
679
C
C
684
A
A
718
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_001477.1
reference
Substitutions
C
C:
N
21
S
C:
G
70
S
E
E:
F
96
L
E:
K
203
E
E:
I
293
T
E:
M
297
V
E:
V
365
I
E:
I
378
L
NS1
NS1:
D
92
E
NS1:
S
94
N
NS1:
I
123
V
NS1:
N
146
D
NS1:
D
278
E
NS1:
T
307
I
NS2A
NS2A:
M
133
T
NS2A:
S
142
P
NS2A:
T
148
A
NS2A:
F
159
L
NS2A:
H
162
Q
NS2B
NS2B:
I
39
V
NS3
NS3:
R
15
K
NS3:
R
33
K
NS3:
F
85
L
NS3:
A
91
T
NS3:
V
323
M
NS3:
V
332
A
NS3:
Y
349
H
NS3:
V
384
I
NS4A
NS4A:
R
76
K
NS4A:
I
89
M
NS4B
NS4B:
V
116
M
NS5
NS5:
I
34
M
NS5:
Y
127
H
NS5:
K
166
R
NS5:
I
181
V
NS5:
V
190
I
NS5:
D
274
N
NS5:
R
378
K
NS5:
S
629
T
NS5:
K
647
E
NS5:
F
881
Y
prM
prM:
S
28
F
prM:
T
83
N
prM:
K
118
R
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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