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PPD_00JT52L.1

Uganda/PPD_00JT52L.1/2026-06-04
S. Kanyerezi, A. Ayitewala, A. Nsawotebba, H. R. Oundo, J. Sseruyange, W. Tenywa, G. Tusabe, M. Murungi, V. Nakintu, C. Makoha, J. M. Kabahita, I. Mugerwa, F. S. Ddumba, A. Mbambu, S. Namakula, A. Kagirita, B. Lubwama, R. M. Eilu, M. Otita, S. Giduddu, A. Ssemaganda, S. Nabadda & I. Ssewanyana

The Central Public Health Laboratories, Kampala

Outbreak

Amino acid substitutions from outbreak clade founder
  • VP30:T52I
Outbreak
Bdbv-2026

Sample details

Collection date
2026-06-04
Sampling location
Uganda (Uganda; Arua)
Isolate name
CL024202

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-07-04
NCBI update date
2026-07-05

Host

Host

Submission details

Submission ID
OZ491541.1
Submitting group
Date submitted
2026-07-05 22:30:32 UTC
Date released
2026-07-05 22:30:46 UTC
Earliest release date
2026-07-04

Alignment and QC

Length
18805 (94.8%)
# of SNPs
196
# of unknown bases
849

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C135T
  • A175G
  • C261T
  • A266G
  • C530T
  • T586C
  • G832A
  • C1018T
  • A1066G
  • T1375C
  • T1405C
  • G1630A
  • T2049C
  • G2067A
  • G2087A
  • G2093A
  • C2163T
  • T2188C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

GP

  • GP:Y151F
  • GP:E188K
  • GP:P365S
  • GP:P367L

GP_003

  • GP_003:Y151F
  • GP_003:E188K
  • GP_003:T320I
  • GP_003:P328L
  • GP_003:Q367*

L

  • L:V402I
  • L:L1011F
  • L:S1323A
  • L:N1342H
  • L:K1570R
  • L:L1595Q
  • L:I1664R
  • L:K1738N
  • L:Q1770R
  • L:N1771D
  • L:I1784V
  • L:R1954G
  • L:E1969D
  • L:A2191V

NP

  • NP:V531A
  • NP:R537K
  • NP:V544I
  • NP:D546N
  • NP:A569V

VP24

  • VP24:S24N

VP30

  • VP30:H5Y
  • VP30:T52I

VP35

  • VP35:N79S
  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:A31S
Deletions
N/A
Insertions
N/A

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