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Yellow Fever Virus
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PPD_00JSFHF.1
Download
Download FASTA
Download metadata TSV
YFV/unknown/PPD_00JSFHF.1/2022-02-16
C. A. Hansen,
S. Rast,
J. K. Thompson,
H. Hao,
D. Jupiter,
S. Higgs,
N. Bourne &
A. D. T. Barrett
University of Texas Medical Branch, Pathology
Sample details
Collection date
2022-02-16
Isolate name
French neurotropic vaccine (Dakar)
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Clade
Clade
V
INSDC
INSDC accession
PX766929.1
NCBI release date
2026-06-24
NCBI update date
2026-06-24
Submission details
Submission ID
PX766929.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-27 20:30:38 UTC
Date released
2026-06-27 20:30:58 UTC
Earliest release date
2026-06-24
Alignment and QC
Length
10760 (100%)
# of SNPs
223
# of deleted bases
102
Nucleotide mutations
Mutations called relative to the
NC_002031.1
reference
Substitutions
A
142
G
T
247
C
A
304
G
C
310
A
T
357
C
C
370
T
G
373
A
G
382
T
A
386
G
G
491
A
A
499
G
C
502
T
G
554
A
G
556
A
C
676
T
G
682
A
A
688
G
G
701
A
Show more
Deletions
10367-10468
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_002031.1
reference
Substitutions
2K
2K:
Y
9
F
2K:
A
20
V
C
C:
H
64
Q
C:
V
80
A
C:
S
90
G
E
E:
I
6
V
E:
T
7
A
E:
R
52
G
E:
A
54
V
E:
V
56
A
E:
N
71
D
E:
R
140
K
E:
N
151
D
E:
N
153
K
E:
A
163
V
E:
V
170
A
E:
I
173
T
E:
A
178
V
E:
T
200
K
E:
N
249
D
E:
I
299
M
E:
F
305
S
E:
S
325
P
Show more
NS1
NS1:
F
79
L
NS1:
V
307
I
NS1:
R
338
M
NS2a
NS2a:
M
30
V
NS2a:
I
82
V
NS2a:
T
105
A
NS2a:
V
118
M
NS2a:
T
147
A
NS2a:
A
167
T
NS2a:
F
169
L
NS2a:
A
172
T
NS2a:
F
183
S
NS2b
NS2b:
L
37
I
NS2b:
S
60
A
NS2b:
L
109
I
NS2b:
G
127
R
NS3
NS3:
R
62
W
NS3:
V
103
A
NS3:
M
192
K
NS3:
V
195
I
NS3:
A
264
V
NS3:
V
280
I
NS3:
N
350
S
NS3:
N
485
D
NS3:
T
518
I
NS4a
NS4a:
E
4
D
NS4a:
I
58
L
NS4a:
I
77
L
NS4a:
V
107
I
NS4b
NS4b:
S
23
G
NS4b:
E
145
K
NS4b:
H
232
Y
NS4b:
M
239
A
NS4b:
G
248
A
RdRPol
RdRPol:
S
2
T
RdRPol:
D
20
N
RdRPol:
R
22
Q
RdRPol:
I
132
V
RdRPol:
I
258
T
RdRPol:
E
279
K
RdRPol:
I
328
L
RdRPol:
R
335
K
RdRPol:
E
418
D
RdRPol:
F
531
L
RdRPol:
K
660
R
RdRPol:
M
813
R
RdRPol:
K
836
E
RdRPol:
H
866
N
RdRPol:
I
878
V
RdRPol:
L
901
P
prM
prM:
V
4
M
prM:
V
25
I
prM:
A
74
T
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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