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PPD_00JS689.1
Download
Download FASTA
Download metadata TSV
DENV-3/Reunion/DENV3_RUN_S55b13_2025/2025-10-09
E. Frumence,
T. Fourie,
N. Traversier &
M.-C. Jaffar-Bandjee
CHU de la Reunion, Laboratoire de virologie, CNR associe Arbovirus
Sample details
Collection date
2025-10-09
Sampling location
Reunion
Isolate name
DENV3_RUN_S55b13_2025
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-06-17 08:02
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage & Serotype
Lineage
3III_B.3
Serotype
DENV-3
INSDC
INSDC accession
PZ521693.1
NCBI release date
2026-06-16
NCBI update date
2026-06-16
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PZ521693.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-17 08:02:19 UTC
Date released
2026-06-17 08:05:18 UTC
Earliest release date
2026-06-16
Alignment and QC
Length
10162 (94.9%)
# of SNPs
441
Nucleotide mutations
Mutations called relative to the
NC_001475.2
reference
Substitutions
C
203
T
T
235
C
T
250
C
C
256
T
A
265
G
C
289
T
T
295
C
T
308
C
G
322
T
C
334
T
C
358
T
C
383
A
C
469
G
T
496
G
T
556
C
G
565
A
C
676
T
T
679
C
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_001475.2
reference
Substitutions
2K
2K:
L
17
M
2K:
T
20
I
C
C:
F
72
L
C:
Q
97
K
E
E:
V
158
I
E:
T
168
I
E:
A
219
T
E:
S
271
L
E:
I
380
T
E:
E
404
A
E:
V
459
I
NS1
NS1:
I
71
V
NS1:
L
94
I
NS1:
L
178
M
NS1:
K
214
R
NS1:
T
233
S
NS1:
S
290
N
NS2A
NS2A:
L
23
M
NS2A:
F
38
L
NS2A:
V
127
I
NS2A:
V
150
I
NS2B
NS2B:
P
57
A
NS3
NS3:
F
31
L
NS3:
E
43
D
NS3:
T
112
M
NS3:
T
176
A
NS3:
E
181
D
NS3:
D
392
E
NS4A
NS4A:
D
36
H
NS4A:
V
100
I
NS4B
NS4B:
I
115
V
NS4B:
M
151
I
NS4B:
S
157
P
NS4B:
F
160
Y
NS4B:
A
233
T
NS5
NS5:
V
72
I
NS5:
T
188
A
NS5:
V
234
I
NS5:
A
372
V
NS5:
R
382
G
NS5:
E
429
D
NS5:
I
553
T
NS5:
Q
562
L
NS5:
L
603
V
NS5:
T
629
S
NS5:
L
639
P
NS5:
E
820
D
NS5:
V
830
I
prM
prM:
T
5
S
prM:
G
7
D
prM:
H
11
R
prM:
S
15
G
prM:
Q
17
N
prM:
S
28
A
prM:
A
29
S
prM:
V
31
I
prM:
L
44
M
prM:
E
46
D
prM:
M
49
V
prM:
R
55
H
prM:
T
59
V
prM:
D
62
E
prM:
V
64
I
prM:
A
70
L
prM:
E
72
S
prM:
S
81
N
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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