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PPD_00JRAFT.1

Kazakhstan/PPD_00JRAFT.1/2025
K. T. Maikhin, M. A. Berdikulov, G. K. Mussayeva, T. Karibayev, S. Zhussambayeva, S. K. Samarkhanov, B. Koigeldinova, K. Kalkabayev, B. Momynov, A. Kuanyshbek, A. Shevtsov, D. Kamalova & K. Botagoz

National Center for Biotechnology, Laboratory of Applied Genetics

Sample details

Collection date
2025
Sampling location
Kazakhstan (Zhambyl Region, Otyrar District, Village of Merke)
Isolate name
CCHV-2025/16

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-15 07:37insdc_ingest_userOPEN
Data use terms URL

Lineage

Segment S Lineage
III

INSDC

INSDC accession S
NCBI release date
2026-06-14

Submission details

Submission ID
PZ269563.1.S
Submitting group
Date submitted
2026-06-15 07:37:40 UTC
Date released
2026-06-15 07:38:08 UTC
Earliest release date
2026-06-14

Alignment and QC

Length S
474 (28.2%)
# of SNPs S
39
# of inserted bases S
1
# of ambiguous bases S
1
# of frame shifts S
1
Frame shifts S
NP:43-483(nt:182-1504)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C166G
  • C178A
  • G189A
  • T199C
  • G202A
  • A209G
  • C235T
  • C241T
  • A247G
  • G271A
  • C295T
  • A298G
  • A322G
  • A327G
  • G346A
  • A349G
  • A355G
  • A358C
Deletions
N/A
Insertions

S

ins_181:T

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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