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PPD_00JRAEV.1

Kazakhstan/PPD_00JRAEV.1/2025
K. T. Maikhin, M. A. Berdikulov, G. K. Mussayeva, T. Karibayev, S. Zhussambayeva, S. K. Samarkhanov, B. Koigeldinova, K. Kalkabayev, B. Momynov, A. Kuanyshbek, A. Shevtsov, D. Kamalova & K. Botagoz

National Center for Biotechnology, Laboratory of Applied Genetics

Sample details

Collection date
2025
Sampling location
Kazakhstan (Turkestan Region, Otyr District, Karakonyr Village)
Isolate name
CCHV-2025/5

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-15 07:37insdc_ingest_userOPEN
Data use terms URL

Lineage

Segment S Lineage
IV.2

INSDC

INSDC accession S
NCBI release date
2026-06-14

Submission details

Submission ID
PZ269562.1.S
Submitting group
Date submitted
2026-06-15 07:37:40 UTC
Date released
2026-06-15 07:38:08 UTC
Earliest release date
2026-06-14

Alignment and QC

Length S
420 (25.3%)
# of SNPs S
68
# of deleted bases S
3
# of frame shifts S
1
Frame shifts S
NP:167-171(nt:552-568)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T220C
  • G229A
  • C235T
  • C241T
  • A247G
  • T250A
  • G262A
  • A268C
  • G271A
  • T277C
  • T283C
  • T289C
  • C295T
  • A298C
  • A322G
  • A325G
  • T334G
  • A337G
Deletions

S

551, 569, 570
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
  • NP:P159H
Deletions

NP

NP:166, NP:172, NP:173
Insertions
N/A

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