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PPD_00JQBHP.1

Slovakia/PPD_00JQBHP.1/2026-03-30
T. Sladecek

Science Park of Comenius University of Bratislava, Ilkovicova 8, 841 04 Bratislava

Sample details

Collection date
2026-03-30
Sampling location
Slovakia
Isolate name
RNA

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-03 12:40insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-06-02
NCBI update date
2026-06-03

Host

Host

Submission details

Submission ID
OZ478017.1
Submitting group
Date submitted
2026-06-03 12:40:26 UTC
Date released
2026-06-03 12:40:49 UTC
Earliest release date
2026-06-02

Alignment and QC

Length
15216 (99.9%)
# of SNPs
158
# of inserted bases
5
# of deleted bases
2

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • A16G
  • A134G
  • G513T
  • T540C
  • G579A
  • C688T
  • C829T
  • C998A
  • C1148T
  • G1385A
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2535T
  • C2554T
  • C2691T
  • A2928G
Deletions

973, 4588
Insertions

ins_3115:A, ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:R42K
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T131A
  • G:I137T
  • G:N202K
  • G:P214S
  • G:P221L
  • G:I252T
  • G:K256N
  • G:S265P
  • G:I268T
  • G:S275P
  • G:Y285H

L

  • L:Y177H
  • L:K570R
  • L:K1186R
  • L:V1646A
  • L:R1759K
  • L:V1965I
  • L:T1987I

M2-1

  • M2-1:N175S

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
Deletions
N/A
Insertions
N/A

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