This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.
PPD_00JMP90.1
R. Steigerwald

Data use terms

Data use terms
OPEN

INSDC

INSDC accession
NCBI release date
2012-08-31
NCBI update date
2012-09-29

Host

Host

Submission details

Submission ID
HV753275.1
Date submitted
2026-05-19 12:16:35 UTC
Date released
2026-05-19 12:17:15 UTC
Earliest release date
2012-08-31

Alignment and QC

Length
2031 (58.3%)
# of SNPs
472
# of inserted bases
1
# of deleted bases
9010
# of frame shifts
2
Frame shifts
GP:296-677(nt:6905;6905-8050),GP_003:296-374(nt:6905-7142)

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions

  • T6026C
  • A6032T
  • A6041C
  • A6044G
  • T6045C
  • G6047C
  • C6050T
  • C6051A
  • T6053G
  • C6059G
  • A6063C
  • A6065G
  • A6071C
  • T6072A
  • C6073G
  • A6074T
  • T6077C
  • T6083C
Deletions

8042-17051
Insertions

ins_6904:G

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue