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PPD_00JM0RQ.1

Argentina/PPD_00JM0RQ.1/2017
D. O. Alonso, S. D. Kehl, R. M. Coelho, N. Periolo, J. Campos, T. Poklepovich Caride, U. Perez-Sautu, M. Sanchez-Lockhart, G. Palacios, C. M. Bellomo & V. P. Martinez

Malbran Institute, Virology

Sample details

Collection date
2017
Sampling location
Argentina (Buenos Aires)
Isolate name
BA17_SD1583

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 18:05insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession M
NCBI release date
2024-09-14

Host

Host

Submission details

Submission ID
PP003838.1.M
Submitting group
Date submitted
2026-05-09 18:05:13 UTC
Date released
2026-05-09 18:06:54 UTC
Earliest release date
2024-09-14

Alignment and QC

Length M
3561 (88.9%)
# of SNPs M
659
# of inserted bases M
16
# of deleted bases M
35
# of unknown bases M
318

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

M

  • C67T
  • G70A
  • T75C
  • C76T
  • T78G
  • A89C
  • G93A
  • C94T
  • C111T
  • G114A
  • T120C
  • T123C
  • G126A
  • T129C
  • A131G
  • A132G
  • C147T
  • G153A
Deletions

M

3476-3488, 3509-3516, 3554-3559, 3575-3579, 3583-3585
Insertions

M

ins_3498:CC, ins_3544:GCTTATATGTCTTA

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:V7I
  • GPC:Y13S
  • GPC:K27R
  • GPC:S51P
  • GPC:A54T
  • GPC:I114V
  • GPC:P117S
  • GPC:V126I
  • GPC:L153A
  • GPC:S168N
  • GPC:I185V
  • GPC:D206E
  • GPC:T207M
  • GPC:I212V
  • GPC:S213T
  • GPC:E222D
  • GPC:V226L
  • GPC:L234I
Deletions
N/A
Insertions
N/A

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