PPD_00JM08R.1

Argentina/PPD_00JM08R.1/2010

D. O. Alonso, S. D. Kehl, R. M. Coelho, N. Periolo, J. Campos, T. Poklepovich Caride, U. Perez-Sautu, M. Sanchez-Lockhart, G. Palacios, C. M. Bellomo & V. P. Martinez

Malbran Institute, Virology

Sample details

Collection date

2010

Sampling location

Argentina (Buenos Aires)

Isolate name

BA10-OE1169

Data use terms

Changed	User	Data use terms
2026-05-09 18:05	insdc_ingest_user	OPEN

OPEN

Data use terms URL

https://pathoplexus.org/about/terms-of-use/open-data

INSDC

INSDC accession S

OR908893.1

NCBI release date

2024-09-06

Host

human (Homo sapiens)

Submission details

Submission ID

OR908893.1.S

Submitting group

Automated Ingest from INSDC/NCBI Virus by Loculus

Date submitted

2026-05-09 18:05:13 UTC

Date released

2026-05-09 18:06:54 UTC

Earliest release date

2024-09-06

Alignment and QC

Length S

1852 (97.4%)

# of SNPs S

295

# of inserted bases S

# of deleted bases S

# of frame shifts S

Frame shifts S

N:429(nt:1327-1329)

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

S

G33T
G63A
G66A
C72T
A90G
G120A
G129A
G133A
A135G
C156G
T225C
A234G
A240C
T244C
T262C
C310T
A312G
A321G

Deletions

S

1352-1357, 1400-1403, 1473, 1500, 1527-1532, 1636, 1645, 1656-1661, 1717, 1755-1757, 1760-1762

Insertions

S

ins_1326:TAAGAGCCAACAACATG, ins_1334:ACAG, ins_1338:TG, ins_1383:T, ins_1451:A, ins_1483:C, ins_1553:GAAT, ins_1568:AGCAT, ins_1587:GTATAGATTTTGATTAGG, ins_1625:TGC, ins_1641:GC, ins_1744:TGCT

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references