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PPD_00JLZDJ.1

Argentina/PPD_00JLZDJ.1/2020-11
R. M. Coelho, N. Periolo, C. P. Duhalde, D. O. Alonso, C. M. Bellomo, M. Corazza, A. A. Iglesias & V. P. Martinez

INEI - ANLIS "Dr. C. G. Malbran", Virology

Sample details

Collection date
2020-11
Sampling location
Argentina (Buenos Aires province)
Isolate name
Plata

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 18:05insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession M
INSDC accession S
NCBI release date
2022-04-12

Host

Host

Submission details

Submission ID
OL840326.1.M/OL840325.1.S
Submitting group
Date submitted
2026-05-09 18:05:13 UTC
Date released
2026-05-09 18:06:54 UTC
Earliest release date
2022-04-12

Alignment and QC

Length M
150 (4.09%)
# of SNPs M
27
Length S
492 (26.3%)
# of SNPs S
61

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

M

  • T2757A
  • T2766A
  • T2775C
  • A2778G
  • A2781C
  • T2790C
  • T2793C
  • A2796G
  • T2799C
  • A2814C
  • A2820G
  • T2823C
  • A2826T
  • C2829T
  • A2832G
  • T2838C
  • A2847T
  • A2850T

S

  • C72T
  • C75A
  • G120A
  • G133A
  • A135G
  • C156G
  • A219G
  • T225C
  • G231A
  • T262C
  • A321G
  • T327C
  • C328T
  • A333G
  • G339C
  • C345T
  • T354C
  • T357C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:E933D

N

  • N:A31T
  • N:D38E
  • N:K120R
  • N:A121S
  • N:T155P

NSs

  • NSs:Q5R
  • NSs:T12R
  • NSs:E33G
  • NSs:L35S
  • NSs:G37D
Deletions
N/A
Insertions
N/A

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