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PPD_00JLW8X.1

Switzerland/PPD_00JLW8X.1/2016-12-26
C. M. Beuret & D. Siegrist

Spiez Laboratory, Virology

Sample details

Collection date
2016-12-26
Sampling location
Switzerland
Isolate name
ANDV LS-CH-2016 ex Chile

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 18:05insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession S
NCBI release date
2018-01-29

Host

Host

Submission details

Submission ID
KY659432.1.S
Submitting group
Date submitted
2026-05-09 18:05:13 UTC
Date released
2026-05-09 18:05:52 UTC
Earliest release date
2018-01-29

Alignment and QC

Length S
1874 (100%)
# of SNPs S
123
# of inserted bases S
5
# of deleted bases S
2

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

S

  • G63A
  • G66A
  • T117C
  • G120A
  • C134G
  • A135G
  • A140T
  • A219G
  • T225C
  • T244C
  • T306C
  • A312G
  • G315A
  • A318G
  • T357C
  • T363C
  • G378A
  • C417T
Deletions

S

1443, 1573
Insertions

S

ins_1555:A, ins_1631:TTT, ins_1668:T

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

N

  • N:A31G
  • N:E33V
  • N:M181T

NSs

  • NSs:Q5G
  • NSs:R7W
  • NSs:E33G
  • NSs:L35S
  • NSs:I62T
Deletions
N/A
Insertions
N/A

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