This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

PPD_00JLQ91.1

Brazil/PPD_00JLQ91.1/2004-06
C. Ramsden, F. L. Melo, L. M. Figueiredo, E. C. Holmes, P. M. Zanotto, C. T. Braconi & P. M. A. Zanotto

LEMB, Institute of Biomedical Science, Dept. Microbiology

Sample details

Collection date
2004-06
Sampling location
Brazil
Isolate name
SS_DF_bol5/1808

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 18:05insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession M
NCBI release date
2007-12-09

Host

Host

Submission details

Submission ID
EU170163.1.M
Submitting group
Date submitted
2026-05-09 18:05:13 UTC
Date released
2026-05-09 18:05:52 UTC
Earliest release date
2007-12-09

Alignment and QC

Length M
312 (8.5%)
# of SNPs M
71

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

M

  • C1995A
  • C1997T
  • A2004T
  • G2007A
  • A2016C
  • A2017C
  • G2019T
  • G2022A
  • T2023G
  • A2025T
  • C2028G
  • G2040T
  • T2043A
  • T2049A
  • T2055G
  • A2059C
  • G2070A
  • A2073T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

GPC

  • GPC:A649V
  • GPC:M656L
  • GPC:S658A
  • GPC:I670L
  • GPC:E701D
  • GPC:V714I
  • GPC:P721S
  • GPC:T729V
  • GPC:F730L
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue