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PPD_00JKH6G.1

USA/PPD_00JKH6G.1/2026-03-24
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-03-24
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04527

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-01 07:31insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.6

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-04-26
NCBI update date
2026-04-26
Raw reads accession

Host

Host

Submission details

Submission ID
PZ295530.1
Submitting group
Date submitted
2026-05-01 07:31:35 UTC
Date released
2026-05-01 07:40:42 UTC
Earliest release date
2026-04-26

Alignment and QC

Length
15136 (95.2%)
# of SNPs
148
# of deleted bases
2
# of unknown bases
652

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G434A
  • A511G
  • G513T
  • G546A
  • G579A
  • C610T
  • T660C
  • T760C
  • C817T
  • C904A
  • C988T
  • C1005T
  • C1204T
  • A1357G
  • G1385A
  • C1429T
  • G1480A
  • T1534C
Deletions

973, 7402
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:R209Q
  • F:S211N

G

  • G:A74V
  • G:I87T
  • G:R98G
  • G:S119P
  • G:K199R
  • G:L217P
  • G:I252T
  • G:R260K
  • G:S265P
  • G:I268T
  • G:L270P
  • G:S275P
  • G:S283P
  • G:L284P
  • G:Y285H
  • G:*311Q

L

  • L:K192R
  • L:I1719T
  • L:F1731L
  • L:E1738G
  • L:T1742M
  • L:F1760L
  • L:T1987I
  • L:P2013T
  • L:E2165D

M2-1

  • M2-1:T180I

M2-2

  • M2-2:I2T

N

  • N:V97I

NS1

  • NS1:M126I

NS2

  • NS2:I26T
Deletions
N/A
Insertions
N/A

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