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PPD_00JJHLP.1

Japan/PPD_00JJHLP.1/2026-03-28
N. Tsuru & M. Shinden

Microbiology department; 2-3-2,Gakuenkibanadainishi, Miyzaki city, Miyazaki 889-2155

Sample details

Collection date
2026-03-28
Sampling location
Japan (Miyazaki)
Isolate name
MVs/Miyazaki.JPN/13.26/1[B3]

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-22 01:25insdc_ingest_userOPEN
Data use terms URL

Genotype

Genotype
B3

INSDC

INSDC accession
NCBI release date
2026-04-18
NCBI update date
2026-04-18

Host

Host

Submission details

Submission ID
LC924313.1
Submitting group
Date submitted
2026-04-22 01:25:31 UTC
Date released
2026-04-22 01:34:29 UTC
Earliest release date
2026-04-18

Alignment and QC

Length
450 (2.83%)
# of SNPs
40

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions

  • C1253T
  • C1271T
  • C1325T
  • T1328C
  • G1334A
  • C1337T
  • A1387G
  • A1394G
  • A1397G
  • G1398A
  • C1409T
  • A1415G
  • T1418C
  • G1423A
  • G1434A
  • G1435A
  • T1436C
  • G1439A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_001498.1 reference

Substitutions

N

  • N:N427S
  • N:G431R
  • N:R439K
  • N:G443N
  • N:Y451H
  • N:G455E
  • N:S456P
  • N:A462V
  • N:S470G
  • N:M471T
  • N:S481F
  • N:G482S
  • N:L505S
  • N:G509D
Deletions
N/A
Insertions
N/A

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