PPD_00EP3BG.1

Spain/PPD_00EP3BG.1/2024-09-20

C. S. Casimiro-Soriguer, J. Perez-Florido, J. L. Fernandez-Rueda, I. Pedrosa-Corral, V. Guillot-Sulay, N. Lorusso, L. J. Martinez-Gonzalez, J. M. Navarro-Mari, J. Dopazo, S. Sanbonmatsu-Gamez, E. A. Robles, M. Lara, A. Aguado, M. A. Rodriguez Iglesias, J. A. Lepe, F. Garcia, M. Perez-Alegre, E. Andujar, V. E. Jimenez, L. P. Camino, N. Loruso, U. Ameyugo, I. M. Vazquez, C. M. Lozano & J. A. Chaves

Clinical Bioinformatics Area, Hospital Virgen del Rocio, Avenida Manuel Siurot s/n, 41003

Sample details

Collection date

2024-09-20

Sampling location

Spain

Isolate name

unavailable

Data use terms

Changed	User	Data use terms
2026-04-15 08:10	insdc_ingest_user	OPEN

OPEN

Data use terms URL

https://pathoplexus.org/about/terms-of-use/open-data

Lineage

INSDC

INSDC accession

OZ293778.1

BioProject accession

PRJEB43037

BioSample accession

SAMEA118820906

NCBI release date

2025-08-01

NCBI update date

2025-10-21

Raw reads accession

ERR15364091

Host

human (Homo sapiens)

Submission details

Submission ID

OZ293778.1

Submitting group

Automated Ingest from INSDC/NCBI Virus by Loculus

Date submitted

2026-04-15 08:09:02 UTC

Date released

2026-04-15 08:52:58 UTC

Earliest release date

2025-08-01

Alignment and QC

Length

10846 (96.4%)

# of SNPs

446

# of unknown bases

218

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

A53G
T195A
T234C
C282T
A321G
C340T
G354A
G447T
C483T
G492A
G495T
C561T
C600T
T606C
T615C
A630G
T639C
G786A

Deletions

N/A

Insertions

N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference