This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the
example data
repository. This instance should not be used for analysis.
X
Pathoplexus
Organisms
HMPV
SeqSets
News
About
Docs
Login
Pathoplexus
Organisms
Crimean-Congo Hemorrhagic Fever Virus
Dengue Virus
Ebola Sudan
Ebola Zaire
HMPV
Marburg Virus
Measles Virus
Mpox Virus
RSV-A
RSV-B
West Nile Virus
Yellow Fever Virus
SeqSets
News
About
Docs
Login
API docs
Governance
Legal notice
Funding
Contact
Status
HMPV
|
Browse data
Submit sequences
Tools
Select organism section
Browse data
Submit sequences
Tools
PPD_00DTNM3.1
Download
Download FASTA
Download metadata TSV
USA/PPD_00DTNM3.1/2025-04-01
A. S. Lauring &
L. K. Papalambros
University Of Michigan, Internal Medicine - Infectious Disease
Sample details
Collection date
2025-04-01
Sampling location
USA
Isolate name
hMPV-G25Y93Q0
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-04-15 08:08
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A2.2.2
INSDC
INSDC accession
PX444167.1
BioProject accession
PRJNA1181811
NCBI release date
2025-10-11
NCBI update date
2025-10-11
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PX444167.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-04-15 08:07:28 UTC
Date released
2026-04-15 09:42:55 UTC
Earliest release date
2025-10-11
Alignment and QC
Length
13248 (96.2%)
# of SNPs
1026
# of inserted bases
93
# of deleted bases
28
# of unknown bases
336
# of frame shifts
1
Frame shifts
G:200-237(nt:6844-6957)
Nucleotide mutations
Mutations called relative to the
NC_039199.1
reference
Substitutions
A
51
G
T
70
C
A
117
G
G
126
A
T
129
C
T
138
A
G
180
A
G
195
A
A
204
G
G
208
A
C
213
T
T
249
C
T
259
C
A
264
G
G
276
A
T
285
C
G
288
A
G
291
A
Show more
Deletions
4683-4709, 6228
Insertions
ins_6118:A, ins_6789:AAATCGACAGCCCATAGAAGAAACATCCCAAGCACAGTCTCCAGAACACAACTCCCATCACGGGCA, ins_6843:AGACCAACCGCAACATCAGTCCAGT, ins_7133:T
Amino acid substitutions
Substitutions called relative to the
NC_039199.1
reference
Substitutions
F
F:
R
82
K
F:
A
185
D
F:
F
258
I
F:
G
294
E
F:
S
466
N
F:
T
504
S
F:
V
510
I
F:
K
518
R
F:
N
539
S
G
G:
T
10
A
G:
L
14
F
G:
K
29
R
G:
V
34
I
G:
T
40
A
G:
L
41
M
G:
K
54
T
G:
M
55
I
G:
N
58
T
G:
T
59
A
G:
S
69
P
G:
M
71
T
G:
S
74
N
G:
R
75
K
G:
P
78
S
G:
V
80
I
G:
T
82
I
G:
S
85
P
Show more
L
L:
I
75
V
L:
S
132
G
L:
K
162
R
L:
V
182
I
L:
I
245
M
L:
W
390
L
L:
K
496
T
L:
T
505
A
L:
K
538
R
L:
D
546
E
L:
G
760
D
L:
S
769
R
L:
S
895
T
L:
R
951
K
L:
A
954
T
L:
R
957
K
L:
A
960
T
L:
D
1037
E
Show more
M
M:
I
23
V
M:
K
87
R
M2-1
M2-1:
V
130
I
M2-1:
E
170
D
M2-2
M2-2:
H
35
Q
M2-2:
D
37
E
N
N:
A
57
T
N:
V
92
A
N:
I
103
V
N:
H
220
Y
P
P:
G
31
S
P:
A
59
T
P:
T
78
I
P:
K
79
R
P:
I
82
A
P:
A
85
T
P:
V
88
I
P:
L
116
S
P:
V
214
I
P:
K
227
R
P:
S
239
N
P:
S
242
T
P:
T
280
L
P:
S
284
N
SH
SH:
S
9
N
SH:
V
33
A
SH:
L
44
F
SH:
S
68
P
SH:
K
71
E
SH:
S
74
P
SH:
N
87
D
SH:
S
96
R
SH:
N
103
D
SH:
A
105
V
SH:
S
108
K
SH:
N
115
S
SH:
S
132
P
SH:
T
135
S
SH:
T
137
I
SH:
N
139
S
SH:
K
142
R
SH:
P
151
S
Show more
Deletions
N/A
Insertions
G
ins_G:180:TKSTAHRRNIPSTV, ins_G:199:LRTSSATRRPTATSVQ
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue