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PPD_00DE40P.1

Guinea/PPD_00DE40P.1/2021-02-26
A. K. Keita, F. R. Koundouno, M. Faye, A. Dux, J. Hinzmann, H. Diallo, A. Ayouba, F. Le Marcis, B. Soropogui, K. Ifono, M. M. Diagne, M. S. Sow, J. A. Bore, S. Calvignac-Spencer, N. Vidal, J. Camara, M. B. Keita, A. Renevey, A. Diallo, A. K. Soumah, S. L. Millimono, A. Mari-Saez, M. Diop, A. Dore, ..., S. Guenther

Bernhard Nocht Institute for Tropical Medicine, Virology dpt.

Sample details

Collection date
2021-02-26
Sampling location
Guinea (Nzerekore)
Isolate name
Ebola virus/H.sapiens-wt/GIN/2021/Makona-G0038

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-15 08:07insdc_ingest_userOPEN
Data use terms URL

Outbreak

Outbreak
Ebov-2013/r2021

INSDC

INSDC accession
NCBI release date
2021-06-28
NCBI update date
2021-10-01

Host

Host

Submission details

Submission ID
MZ424857.1
Submitting group
Date submitted
2026-04-15 08:06:32 UTC
Date released
2026-04-15 08:42:22 UTC
Earliest release date
2021-06-28

Alignment and QC

Length
18008 (83.2%)
# of SNPs
457
# of unknown bases
2226

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions

  • A619G
  • A655T
  • G721A
  • C800T
  • A850G
  • A852G
  • A895G
  • T919C
  • C1094T
  • C1108T
  • G1141A
  • C1198T
  • T1199C
  • T1309C
  • A1417G
  • A1447C
  • T1456C
  • A1495G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_002549.1 reference

Substitutions

GP

  • GP:A82V
  • GP:T262A
  • GP:V310A
  • GP:A315P
  • GP:G331E
  • GP:T336N
  • GP:E359K
  • GP:S377P
  • GP:L378P
  • GP:P382T
  • GP:E405G
  • GP:T411A
  • GP:S422P
  • GP:P430L
  • GP:T441A
  • GP:F443S
  • GP:P446L
  • GP:H455Y
  • GP:A503V
  • GP:I544T

L

  • L:V79I
  • L:E130D
  • L:F150L
  • L:M197L
  • L:A215T
  • L:I259V
  • L:M337I
  • L:Q346H
  • L:D692N
  • L:D759G
  • L:L888S
  • L:F1142V
  • L:I1240T
  • L:Y1594H
  • L:Q1607H
  • L:S1615N
  • L:S1645N
  • L:Y1654D

NP

  • NP:R111C
  • NP:K128R
  • NP:S465G
  • NP:N478S
  • NP:I517T
  • NP:R525T
  • NP:I527T
  • NP:P531T
  • NP:H534R
  • NP:T631I
  • NP:Q637R
  • NP:S644P
  • NP:E708D
  • NP:K728R

VP24

  • VP24:M212K

VP35

  • VP35:A12V
  • VP35:S41N
  • VP35:T68M
  • VP35:N204D

VP40

  • VP40:V20A
  • VP40:I324V

sGP

  • sGP:A82V
  • sGP:T262A
  • sGP:E314G
  • sGP:G331R
  • sGP:L336M

ssGP

  • ssGP:A82V
  • ssGP:T262A
Deletions
N/A
Insertions
N/A

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