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PPD_00D93CA.1

Japan/PPD_00D93CA.1/2025-04-26
K. Kuroki & R. Kumagai

Department of Microbiology; 3-24-1 Hyakunin-cho, Shinjuku-ku, Tokyo 169-0073

Sample details

Collection date
2025-04-26
Sampling location
Japan (Tokyo)
Isolate name
hMPV_A2b2/G/F25-189/Tokyo/2025

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-15 08:07insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A2.2.2

INSDC

INSDC accession
NCBI release date
2025-07-04
NCBI update date
2025-07-05

Host

Host

Submission details

Submission ID
LC880210.1
Submitting group
Date submitted
2026-04-15 08:06:42 UTC
Date released
2026-04-15 08:32:18 UTC
Earliest release date
2025-07-04

Alignment and QC

Length
867 (5.81%)
# of SNPs
171
# of inserted bases
111
# of deleted bases
20
# of frame shifts
1
Frame shifts
G:228-237(nt:6927-6957)

Nucleotide mutations

Mutations called relative to the NC_039199.1 reference

Substitutions

  • C6339T
  • G6345A
  • G6346A
  • A6364G
  • A6366T
  • T6367A
  • T6375G
  • T6405C
  • A6407C
  • G6411A
  • A6419C
  • C6420T
  • A6421G
  • T6438C
  • C6444T
  • A6450T
  • T6451C
  • T6458C
Deletions

6907-6926
Insertions

ins_6711:ATAGTCTCCAAAACACAACTCCCATCACGGGCAACAACGAAGGCGGTCTCCAGAGCCACCACCCTCAGAACAAAAACAAAATCGACAGCCCACAGAAGAAACATCTCAAGC

Amino acid substitutions

Substitutions called relative to the NC_039199.1 reference

Substitutions

G

  • G:V34I
  • G:T40A
  • G:L41M
  • G:I43M
  • G:K54T
  • G:M55I
  • G:N58T
  • G:T59A
  • G:S69P
  • G:M71T
  • G:S74N
  • G:R75K
  • G:P78S
  • G:V80I
  • G:T82I
  • G:S85Q
  • G:T87I
  • G:S89P
Deletions

G

G:218-227
Insertions

G

ins_G:155:IVSKTQLPSRATTKAVSRATTLRTKTKSTAHRRNISS

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